Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02222 ATGGCGGAACTCCCGTTACCGGAGGTACAGACAAACGGCGTAGGACCAACCGCGACACTAAACCCCTCAGAACCCCACGGATCGAAGCGCCAACGCAGGCCAAGCGTCCGATTAGGCGACATCGGAGACCAACCCTCAGACTCCCACCATCGCCGCACCTCAAAATCCTGGCGATTCGGCATCGGCAACGTCTCAGGTAAACCCTCGAAGACTCGTCCTTTGACCAATTTGACTTCGGTATCCGATTTCGACGAAACACTGGAAAACGAAGAACGAGAAACCAACACAGACGGCGTAATCATCGGTAGCTGGAAAGTGAAACGAGGGTCCAAGAGACCTCGATCGAATTGGGGCTCTTCGCGAATCGACGAAGGCGAAAACATCGATGATGATGATGTGCATCATGATTTTGAAGGTGATAACTCGGGTAGATCGGTTCATTCGTCGGAGAATTTGGGTGAGTACAATGTTAGGGATAGGAATGAAGATGGTGGAAGAGGAAGTTGTGGTGAAGATGGTGTTAGAATTTGGCTTAATGGATTAGGTTTAGGTCGATATGCGCCTGTTTTTCAAATTCATGAGGTTGATGATGAAGTTTTGCCTTTGTTAACACTTGAGGATCTTAAAGATATGGGTATTAATGCAGTTGGTTCTAGAAGGAAATTGCATTGCGCAATTCAGAAGCTTGGGAAGGGTTTCTCATAA 705 0.478 MAELPLPEVQTNGVGPTATLNPSEPHGSKRQRRPSVRLGDIGDQPSDSHHRRTSKSWRFGIGNVSGKPSKTRPLTNLTSVSDFDETLENEERETNTDGVIIGSWKVKRGSKRPRSNWGSSRIDEGENIDDDDVHHDFEGDNSGRSVHSSENLGEYNVRDRNEDGGRGSCGEDGVRIWLNGLGLGRYAPVFQIHEVDDEVLPLLTLEDLKDMGINAVGSRRKLHCAIQKLGKGFS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02222 234 MobiDBLite consensus disorder prediction 109 166 - -
Vivi3g02222 234 PANTHER SCP160 131 231 - -
Vivi3g02222 234 MobiDBLite consensus disorder prediction 26 54 - -
Vivi3g02222 234 Gene3D - 169 229 IPR013761 -
Vivi3g02222 234 ProSiteProfiles SAM domain profile. 172 232 IPR001660 GO:0005515
Vivi3g02222 234 Pfam SAM domain (Sterile alpha motif) 174 229 IPR001660 GO:0005515
Vivi3g02222 234 SMART SAM_4 166 232 IPR001660 GO:0005515
Vivi3g02222 234 MobiDBLite consensus disorder prediction 117 143 - -
Vivi3g02222 234 MobiDBLite consensus disorder prediction 1 78 - -
Vivi3g02222 234 SUPERFAMILY SAM/Pointed domain 171 229 IPR013761 -
Vivi3g02222 234 CDD SAM_superfamily 174 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02222 Vivi-Chr3 36660209 36661300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02222 - - mtr:25491154 377.481