Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02193 ATGGCGTCAATAAGCAACATTGGTTTACGAGGGAATTGGAATCTGAGCAATGCAAAGAAGGAAAATATTGAGATCCATACAGGAAATCTTAGGTTTAATTATTTTCATCCTCACATCAACAAACGAAGATTTTCATTGGTGATTACAGGTTGTAATCACGGAAGTACTTACAATAAAGTGGACACAATTAATGGAACCAAGGTGAATGGTTTGCAAGTGGCTGAGGCTCCGAGAAAATTGACAAGTGAAAATACAACAGATGTTGGTCTTGTTACAAATGGAAAATTTGTTGAAGGAAGGTTTGTGTTTAGACAGATTTTTGTTATTAGATCCTATGAAATTGGTCCTGATAGAACTCTCACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTCTAAATCATGTTACAAGCTCAGGGATAGGAGGAGATGGATTTGGAGCTACACGCGAGATGAGTCTAAGGAAACTCATTTGGGTTGTGACTCGAATTCAGGTTCAAGTGCAAAGATATAACAAATGGGGAGAAGAAATTGAAGTTGATACGTGGGTGGATGCAGCAGGAAAAAATGGAATGCGAAGAGATTGGATAATCAGAGATCATTGTACCGGAGAGATCATAACAAAAGCAACAAGCACATGGGTGATAATGAATAGAGAAACGAGAAGATTATCGAAAATACCCGAAGAAGTTAAAAGAGAGCTTTCTCCTTTTTACATTCATAGGATTGCTGTAGCTAGTGAAGAAAGAGATTGTGAAAAGATAGACAAACTCACTGATGAAACTGCTGAGACAACACGTTCTGGTTTGGCTCCAAGGTGGAATGACATGGATGTTAACCAGCATGTGAACAATGTGAAGTACATCGGATGGATATTAGAGAGTGTGCCGATGAAAGTTCTAGAAGATTACAAAATGAAAAGCTTGACTTTAGAGTATAGGCGTGAATGTACACAATCAAATACGTTGGAATCTATGACATGTCCAACAGAAAGAGTGATAGGTGAATCTGATAATAATTCCAGCAACAGAAAACCTGATCTGCAATACACACACCTACTTCGTTTACAAGATGATAAAAAGGAAGTTGTTCGAGCTAGATCTGAATGGGATTTAAAGCAAAGTCAGCAATGA 1137 0.3799 MASISNIGLRGNWNLSNAKKENIEIHTGNLRFNYFHPHINKRRFSLVITGCNHGSTYNKVDTINGTKVNGLQVAEAPRKLTSENTTDVGLVTNGKFVEGRFVFRQIFVIRSYEIGPDRTLTMETLMNFLQETALNHVTSSGIGGDGFGATREMSLRKLIWVVTRIQVQVQRYNKWGEEIEVDTWVDAAGKNGMRRDWIIRDHCTGEIITKATSTWVIMNRETRRLSKIPEEVKRELSPFYIHRIAVASEERDCEKIDKLTDETAETTRSGLAPRWNDMDVNQHVNNVKYIGWILESVPMKVLEDYKMKSLTLEYRRECTQSNTLESMTCPTERVIGESDNNSSNRKPDLQYTHLLRLQDDKKEVVRARSEWDLKQSQQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02193 378 FunFam Acyl-[acyl-carrier-protein] hydrolase 94 377 - -
Vivi3g02193 378 MobiDBLite consensus disorder prediction 331 350 - -
Vivi3g02193 378 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 62 376 IPR045023 GO:0006633|GO:0016297
Vivi3g02193 378 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 101 246 IPR029069 -
Vivi3g02193 378 Gene3D Hotdog Thioesterase 94 377 - -
Vivi3g02193 378 Pfam Acyl-ACP thioesterase 102 372 IPR002864 GO:0006633|GO:0016790
Vivi3g02193 378 MobiDBLite consensus disorder prediction 331 349 - -
Vivi3g02193 378 CDD 4HBT 103 219 - -
Vivi3g02193 378 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 258 371 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02193 Vivi-Chr3 36164802 36167004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02193 94 374 Acyl Lipid Metabolism Gene Families AT1G08510 56.940 3.73e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02193 K10781 - gmx:100791281 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02193 3 36164802 36167004 Vivi3g02193 3 36164802 36167004 ECH