Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02187 ATGTCTAGAGTGTTTAGCAAATTTCTCTCCGGTGCATTTTTGTCACAAAGCAGAATCAAAACATCAAAATGGAACAAAACTACATTTCGCACTGACGCAGTTGATCTAGAAACCACAATGGAGGAAGCTCAACCAAGTTCTTCATCGGCGAGATCAATCACCAAAGGAAAATCCTCAAATGATCTCAACACCGGTATCACCTTGCTGAACGACGATCTTCTCCACAACATCCTTCCCAGACTCCCTGCTCTATCGTTCGCTTCCGCATCTTGCGTTAGCAAATCATGGAATTCCATTTGCACTCGCATCATTTCTCGTCCCAAGCTCTCTTCCGCACTTTCTCTCAACCCTTCGCTTCGCGAGGCTGTGAAGGAGGTTGTTGACAAGGTTCTATCTGAGCCAATTCGACCTCATTTTGCTATTGTCAATATTGGATGTGGATTCGACGCGAACAAGATTCTTCGCCTTATTAAACAGAAATTAGGGTTGAATATTCCGGTTATTGTCACGGTCAATAATGGTATTATTGGAAGGGACGCTCTTACAGATGAATTTAAAGAGGTCAAATGGGGTGCCCGTTTTAGTGGCATTGGCGACGATGAATATGCAAGACATTTTAATGAAGGCATAGTGTTGACAATTGGCTGCTTGCCAGGAATGAAAGCTGAAGCTATACCGTTACTACGACCGGTAAAGACACCTCAAGAACTATGTGTTGATAATTTTGTTATGGATATCAAAGAATACACAGCCTCTGTCTCTGGTCGCCAATTCCCCGTTGGGGTTATATTATTTGGAGAAGCTAGCACCGACATGAAACTGGTTCTGGAGAAGTTGGATTATGCCATGCCTAAAGACACAGTCATTGTGGGTGATGAGAGAGGCTGCTCTGTATTCAGATACGGAAATGATTCTAGAAATGCTTACAGCTACAGGAAAGGGTTCATAGAAGCTGTTGCTCTTGTATTTGCTCAGGACAGAACCAGGTCTTCTGGAATTGATTTTACTGCAGGAAACATTAGATTTCATGTTGCTTTCTCAATTGGTGTTTCACCTGTGGGTGGCAAATACAAAGCAGCTTCAGTTAGAACAAACAGTGCCGATTATTCGACATGGCTAACTGCCAAAAGGGAATGGCATCAAGAACCTCTTGATGGTGAGACTATTCTGCATGATATTAACACTTTGCTGGAAAATCACATTGAGCCTCCCGAGTTGTACATTGGGGTAACTAAAAATAGGAAAGTCTCCATTGGAGCAGAGAAGCCAATGCCAAGAACTTGTATTGCATATCATGGAGTTGTTGGCGGTGATGAAGAGTATCTGTATGTTGATGGAATGGGCATCAAAACAGGAGATATCTTTCAGTTCTACCATTCAGATCCTAATGCCGCATTGGCTTCATTAACTGAGGTTCGTGATGCCCTTAACAATATGAAGCTGGAGAGGAATTCCAGGAGTGTCAAGGGTGATGGAGAGATTGAGAATGCTACCAATGTTTTTGGCGGTATTCTTTTTGCTTGTTATGGCCGCGGCCATTCATTTTTTGGACGTCCTAATGCTGATAGCTCCCCCTTCTTAGAGATTTTTCCAGGAGTGCCATTGGCTGGAATATTTTGTTGTGGAGAAATGGTGCGTCCTTGTACCACTTTGATTGGTCAATCTCCAGATGCAAAGCCCATCAGTTGCTTTTTGCATGTTTATAGCAGTGTCTATTTAGTGATGTCATATGATCCTCCCTCTGTGGAACATTAG 1755 0.4285 MSRVFSKFLSGAFLSQSRIKTSKWNKTTFRTDAVDLETTMEEAQPSSSSARSITKGKSSNDLNTGITLLNDDLLHNILPRLPALSFASASCVSKSWNSICTRIISRPKLSSALSLNPSLREAVKEVVDKVLSEPIRPHFAIVNIGCGFDANKILRLIKQKLGLNIPVIVTVNNGIIGRDALTDEFKEVKWGARFSGIGDDEYARHFNEGIVLTIGCLPGMKAEAIPLLRPVKTPQELCVDNFVMDIKEYTASVSGRQFPVGVILFGEASTDMKLVLEKLDYAMPKDTVIVGDERGCSVFRYGNDSRNAYSYRKGFIEAVALVFAQDRTRSSGIDFTAGNIRFHVAFSIGVSPVGGKYKAASVRTNSADYSTWLTAKREWHQEPLDGETILHDINTLLENHIEPPELYIGVTKNRKVSIGAEKPMPRTCIAYHGVVGGDEEYLYVDGMGIKTGDIFQFYHSDPNAALASLTEVRDALNNMKLERNSRSVKGDGEIENATNVFGGILFACYGRGHSFFGRPNADSSPFLEIFPGVPLAGIFCCGEMVRPCTTLIGQSPDAKPISCFLHVYSSVYLVMSYDPPSVEH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02187 584 SMART FIST_C_2 389 547 IPR019494 -
Vivi3g02187 584 Gene3D - 61 109 - -
Vivi3g02187 584 Pfam F-box domain 69 105 IPR001810 GO:0005515
Vivi3g02187 584 SMART fbox_2 69 109 IPR001810 GO:0005515
Vivi3g02187 584 SUPERFAMILY F-box domain 65 101 IPR036047 GO:0005515
Vivi3g02187 584 PANTHER F-BOX ONLY PROTEIN 22 64 579 - -
Vivi3g02187 584 Pfam FIST C domain 448 545 IPR019494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02187 Vivi-Chr3 36076152 36084418 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02187 - - vvo:131660999 1174.84