Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02183 ATGGAACTTATCAAACTCAGATCCTTCATTCTCTTCCTTCTCCTCACTCTATCAACAACCTCTGCATTCAACCAAAACCAACCCATCAAAACCATTGTAGTTCTAGTCATGGAGAATCGTTCCTTTGATCACATGTTAGGCTGGATGAAAAAGGCCATCAACCCTTTAATCGACGGTGTAAACGGAGATGAATGCAACCCCGTTTCAACTGAAACCTCAAAAAAAGACACTATCTGTTTCAGTGATGATGCAGAGTTTGTGGATCCGGATCCAGGTCATTCGTTTGAAGATGTTTTGAAACAGGTATTTGGTAATGGTAATGGTAACGCTTCAAATTCTATTCCTTTAATGAATGGTTTTGTGGAACAAGCATTGTCTGTTTCTCAGAATCTTTCTGAGACTGTAATGAAAGGGTTTAAACCGAAATCTGTTCCGGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGGTGGTTTAGTTCGATTCCCGGTCCGACACAACCCAATAGGCTTTTTGTGTATTCTGCAACTTCTCATGGTTCAACTAGTCATGTTAAGAGACAATTAGCCATAGGGTATCCTCAAAAAACTATCTTTGACTCTATGCATGAGAATGGCTTGGATTTTGGGATTTATTTTGAGAACATACCAACAACTTTTTTCTATAGGAACCTAAGGAAGTTGAAGTATATATCGAAGTTTCATCGGTATGAGTCCAAGTTCAAGAAAGATGCTGGAAATGGGAAGCTTCCGTCGTTGACGGTGATTGAGCCGAGGTACTTTGATTTGACGGGCTCGTCTGCGAATGATGATCATCCTTCTCATGATGTTGCTAATGGACAAATGTTGGTTAAGGAGGTTTATGAGACTTTAAGAGCAAGTCCACAATGGAATGAGACTCTTTTGGTTATTACATATGATGAGCATGGTGGGTTTTTTGATCATGTGAAGACTCCTTTTGTTAACATTCCTAACCCGGATGGGAACACAGGGCCTGCTCCTTATTTCTTTAAGTTTGATAGGTTAGGGGTTCGCGTGCCGACTATTATGGTCTCTCCTTGGATCAAGAAAGGGATTGTGGTAAGAAGTCCCAAAGGACCAGCTGCGAACTCCGAGTTTGAGCACTCGTCGATTCCCGCCACCATAAAGAAGATGTTCAACCTTTCCTCTAACTTTTTGACTCACAGAGATGCATGGGCTGGGACATTCGAGGATGTTGTTGGCGAGTTAACTTCACCTAGAACAGATTGTCCAGTCACTTTGCCGGATGTGACGCCTTTAAGGACCACTGAAGCGAAAGAAAATGGCAGCCTCTCTGAGTTTCAGAGTGAGGTTGTTCAGTTGGCAGCTGTTCTGAATGGAGACCACTTCTTGAGCAGTTTCCCGAATGAAATGAGTAAGAAGATGAATGTGAAGGAAGCTCATGATTATGTGACGGGAGCTGTTTCGAGATTCATAAGAGCTAGCAAAGAGGCTATCAAGTTGGGGGCTGATGAGTCTGCTATTGTAGATATGAGATCCTCTCTCACTACTAGATCTTCTACTCACAGTTAA 1560 0.4192 MELIKLRSFILFLLLTLSTTSAFNQNQPIKTIVVLVMENRSFDHMLGWMKKAINPLIDGVNGDECNPVSTETSKKDTICFSDDAEFVDPDPGHSFEDVLKQVFGNGNGNASNSIPLMNGFVEQALSVSQNLSETVMKGFKPKSVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAIGYPQKTIFDSMHENGLDFGIYFENIPTTFFYRNLRKLKYISKFHRYESKFKKDAGNGKLPSLTVIEPRYFDLTGSSANDDHPSHDVANGQMLVKEVYETLRASPQWNETLLVITYDEHGGFFDHVKTPFVNIPNPDGNTGPAPYFFKFDRLGVRVPTIMVSPWIKKGIVVRSPKGPAANSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEDVVGELTSPRTDCPVTLPDVTPLRTTEAKENGSLSEFQSEVVQLAAVLNGDHFLSSFPNEMSKKMNVKEAHDYVTGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSTHS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02183 519 FunFam Non-specific phospholipase C1 251 438 - -
Vivi3g02183 519 FunFam non-specific phospholipase C6 20 197 - -
Vivi3g02183 519 SUPERFAMILY Alkaline phosphatase-like 150 366 IPR017850 -
Vivi3g02183 519 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 22 490 IPR007312 GO:0016788
Vivi3g02183 519 Pfam Phosphoesterase family 29 390 IPR007312 GO:0016788
Vivi3g02183 519 Gene3D Alkaline Phosphatase, subunit A 19 192 IPR017850 -
Vivi3g02183 519 Gene3D Alkaline Phosphatase, subunit A 261 438 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02183 Vivi-Chr3 36019124 36021500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02183 11 514 Acyl Lipid Metabolism Gene Families AT3G48610 77.470 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02183 K01114 - gmx:100786332 867.84