Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02176 ATGGCCGCAGCCGCCGCCACCACCGCCGCCACCACCCCTTCCAGATCTCCGTTCACTCCATCTTCTTCTTCGTATTCCACTTTCCTTAAACGAAACTCTACTCTCACATTCCCTTTCTCTCCCATTTTCAACAAACCACCATCCATTCACACTCGTCCCCTCACTATCTCATCCTCCCTCTCCAACTCGCCGACCGCTCCACCGTCCACCATCTCCACCTCCGATGACCAACACATCTCCCGCTTCTCCTCCACCGAGCCAAGAAAAGGCGCCGACATTCTCGTCGAAGCTCTCGAGCGTCAAGGCGTCACCAACGTGTTCGCTTACCCCGGCGGAGCTTCCATGGAGATCCACCAAGCTCTAACCCGCTCCAAAACAATCCGGAACATACTCCCCCGCCACGAACAAGGTGGAGTCTTCGCCGCCGAAGGCTACGCGCGCTCCTCCGGTCTCCCTGGAGTCTGTATCGCTACCTCCGGTCCCGGTGCTACTAACCTAGTCAGCGGTCTTGCTGATGCGTTGATGGACAGTGTTCCTCTCATCGCCATTACCGGTCAAGTTCCCCGGAGAATGATCGGAACTGATGCTTTTCAAGAAACCCCAATCGTTGAAGTAACGAGATCTATCACAAAGCATAACTACCTCATTCTTGATGTTGAAGATATTCCTAGGGTTGTGAAAGAGGCTTTTTTCCTTGCAACTTCAGGTAGGCCCGGCCCGGTTCTCATCGACGTGCCTAAAGATATTCAACAACAGTTAGCAGTTCCGAATTGGGCCGAGCCCATCAAGCTCACTGGATATGTCTCCAGGCTACCCAAGATTCCTGATGAAGCTCAATTTGAACAGGTTTTGAGGTTAATATTAGAATCTAAAAAACCGGTTTTGTATGTTGGAGGTGGTTGTTTGAATTCCAGTGAGGAATTGAACCGGTTTGTCGAACTAACTGGTATTCCTGTTGCTAGTACTTTAATGGGACTTGGTAGTTACCCTATTGGAGGGGAACATTCCCTTCATATGTTGGGTATGCATGGTACTGTTTATGCTAATTATGCGGTTGATAGTAGTGATTTGTTGCTTGCTTTCGGGGTTAGGTTTGATGATCGTGTAACTGGAAAGTTAGAAGCTTTTGCGAGTAGGGCTAAGATTGTTCATATTGATATTGATTCGGCTGAGATTGGGAAGAATAAGATTCCACATCTGTCGATATGCGCTGATATGAAGGTGGCATTGGAAGGTCTAAATAGGGTTTTGGAGAGTAAAGGAGTTAAGGGTAAACTTGATTTTGAAGCTTGGAGGCAGGAGTTGAATGTTCAGAAATTGAAGTTTCCTCTCGGGTTTAAGACGTTTGAGAATGCGATTTCGCCTCAGTATGCTATTCAGGTTCTTGATGAGTTGACTAATGGAGATGCTATTATTAGTACTGGTGTTGGACAACATCAGATGTGGGCTGCTCAATTTTATGAGTATAAGAGACCTAGGCAGTGGTTAACATCTGGTGGACTCGGTGCTATGGGTTTTGGATTACCGGCTGCTATTGGTGCTGCTGTTGCTAACCCCGATGCGATCGTTGTTGATATTGATGGGGATGGTAGCTTTATAATGAATGTTCAAGAGTTGGCTACTATAAGAGTGGAGAATCTTCCAATTAAGATATTGTTGTTGAATAACCAACATTTGGGTATGGTTGTTCAATGGGAGGATAGATTCTATAAGTCAAACAGAGGTCATACTTATCTTGGTGACCCTTCTAGGGAGGAAGAGATTTTCCCCAACATGCTTGGATTTGCTGATGCTTGTGGAATACCGGCGGCTCGTGTGACAAAGAAGGAAGAGCTTCGAGAAGCTATTCAGAAAATGTTGGACACTCCTGGCCCTTATCTTCTTGATGTCATTACGCCTCATCAAGAACATGTATTGCCAATGATTCCAAGTAATGGATGTTTCAAGGATGTGATCACGGAGGGTGATGGCAGAACAAGCTACTGA 1986 0.4658 MAAAAATTAATTPSRSPFTPSSSSYSTFLKRNSTLTFPFSPIFNKPPSIHTRPLTISSSLSNSPTAPPSTISTSDDQHISRFSSTEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSKTIRNILPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVEDIPRVVKEAFFLATSGRPGPVLIDVPKDIQQQLAVPNWAEPIKLTGYVSRLPKIPDEAQFEQVLRLILESKKPVLYVGGGCLNSSEELNRFVELTGIPVASTLMGLGSYPIGGEHSLHMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHLSICADMKVALEGLNRVLESKGVKGKLDFEAWRQELNVQKLKFPLGFKTFENAISPQYAIQVLDELTNGDAIISTGVGQHQMWAAQFYEYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFIMNVQELATIRVENLPIKILLLNNQHLGMVVQWEDRFYKSNRGHTYLGDPSREEEIFPNMLGFADACGIPAARVTKKEELREAIQKMLDTPGPYLLDVITPHQEHVLPMIPSNGCFKDVITEGDGRTSY 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02176 661 FunFam Acetolactate synthase 273 444 - -
Vivi3g02176 661 FunFam Acetolactate synthase 83 265 - -
Vivi3g02176 661 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 87 646 IPR045229 -
Vivi3g02176 661 MobiDBLite consensus disorder prediction 54 80 - -
Vivi3g02176 661 Gene3D - 281 444 - -
Vivi3g02176 661 Gene3D - 78 271 - -
Vivi3g02176 661 CDD TPP_PYR_POX_like 92 247 - -
Vivi3g02176 661 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 84 264 IPR029061 -
Vivi3g02176 661 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 89 252 IPR012001 GO:0030976
Vivi3g02176 661 NCBIfam biosynthetic-type acetolactate synthase large subunit 89 653 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Vivi3g02176 661 Pfam Thiamine pyrophosphate enzyme, central domain 281 413 IPR012000 GO:0000287|GO:0030976
Vivi3g02176 661 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 475 630 IPR011766 GO:0003824|GO:0030976
Vivi3g02176 661 Gene3D - 445 631 - -
Vivi3g02176 661 MobiDBLite consensus disorder prediction 54 86 - -
Vivi3g02176 661 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 453 652 IPR029061 -
Vivi3g02176 661 CDD TPP_AHAS 453 644 IPR039368 GO:0030976
Vivi3g02176 661 ProSitePatterns Thiamine pyrophosphate enzymes signature. 512 531 IPR000399 GO:0000287|GO:0030976
Vivi3g02176 661 MobiDBLite consensus disorder prediction 1 25 - -
Vivi3g02176 661 SUPERFAMILY DHS-like NAD/FAD-binding domain 276 443 IPR029035 -
Vivi3g02176 661 MobiDBLite consensus disorder prediction 7 25 - -
Vivi3g02176 661 FunFam Acetolactate synthase, mitochondrial 444 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02176 Vivi-Chr3 35947911 35950304 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02176 K01652 - gmx:100798203 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02176 3 35947911 35950304 Vivi3g02176 3 35947911 35950304 ECH