Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02173 ATGAAGGAGCAATCTGATAACAGGAGTACAAAACCTAAAACAGGCACAAAGGAGAAGAAGAAAAGTGAGTTTGAGTTCTGCAAGGTCTGCAATATAAATCACGACCAAGGTATCCGCCACAAGTACTTCCCTAAACACAAAAACTCCCTTTCCACCTTCCTCTCTCGCTTCCAAAACAAACTCTCCGATGTTCGCTATTTCCTCAAAACGCCCTCCCCTCTCAGTCCCGAACTCGCTTCTCGTAATCGCTTCTGGTGTGTTTTCTGTGACCAAGATATCAACGACCTCGCCAGTTCCTTTGCTTGTGAAAGTGCGATTCGTCACCTAGCAAGTGTGGAACATGTAAACAATTTGAAGCACTTCTTTTGGAAATATGGTGGTGCCGTAGATCAGCTGGATGTCTTTAAAGTTTCTGATAATGACATCGCAAAGTGGGAAAAGAGGTGCACGGCCCTTAAAAAAGAAGCTTCTATGCAAAGCGAGGAAAGTCCTGAAGCAGTTTTTGGACCTTCAAGTGATATCCATAATCAATTGAACAATGGAAATATTGATAGTTTTGAAAATATTTATTCCCATTCTATGAAATCATATCCTTCAAATGTTGTTTTGCCTTTACACTGTGACACGGATAAGTATCAGGTATCCTCTTCAGGCCACTCTGGAGTTGGCAATACTGGCCTATTAGATATTGATAACTCTTCTTTACCTTCGGAAGCGTGCTCTAGTGCAAATCCTCTTGCTTTGCAGGATTTTGCAGTTGGAAGGAGTAGTCATTCTCTCCCTTCTAATGGTGGGCAATGGTCAAGTGATGGCTACTCCAGCAATAAAGTGCTTCTTGATAATGGTAAAGTGGTCAATGGAGAGAGCAGTCAGCAAGGTATACAAATGCTCACCCGAATCTCTATTGCGCCCGCTGAAAATAATGCTGGGAATGTTCATTCTGGAGCACCGCCGCCTTGGTTTGAAACAACTGAGGGAGTTCAGATACGTTCTAAGCCTGTTTCAAGACACCTTGTCTCCCATTCAAACAAGTCAGGGAAGCACAAAAAGTTGAATCCTAAACGTGTTGGAGCTGCTTGGGCTGAAAAAAGAAAGATTGAAATGGAGATGGAAAAGAGAGGGGAGATTGTGAGGAACGAATGCGATGCCAACTGGCTTCCTAATTTTGGTAGAGTTTGGCAATCTGGTAGCAGAAGAGAATCAAGAAAAGAATTTGAAAAGGAGAAACAAAAATTGTTAAATGTTGAAACTCAATCTGAGATGCCAATCAAGATACAACCCTATGTTAGCAAAAAAATGCGGATGGATAGTGGCGCTGATCATGCAAGCGGGTGA 1335 0.424 MKEQSDNRSTKPKTGTKEKKKSEFEFCKVCNINHDQGIRHKYFPKHKNSLSTFLSRFQNKLSDVRYFLKTPSPLSPELASRNRFWCVFCDQDINDLASSFACESAIRHLASVEHVNNLKHFFWKYGGAVDQLDVFKVSDNDIAKWEKRCTALKKEASMQSEESPEAVFGPSSDIHNQLNNGNIDSFENIYSHSMKSYPSNVVLPLHCDTDKYQVSSSGHSGVGNTGLLDIDNSSLPSEACSSANPLALQDFAVGRSSHSLPSNGGQWSSDGYSSNKVLLDNGKVVNGESSQQGIQMLTRISIAPAENNAGNVHSGAPPPWFETTEGVQIRSKPVSRHLVSHSNKSGKHKKLNPKRVGAAWAEKRKIEMEMEKRGEIVRNECDANWLPNFGRVWQSGSRRESRKEFEKEKQKLLNVETQSEMPIKIQPYVSKKMRMDSGADHASG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02173 444 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 84 17 437 IPR028015 -
Vivi3g02173 444 Coils Coil 142 162 - -
Vivi3g02173 444 Coils Coil 398 418 - -
Vivi3g02173 444 Pfam Coiled coil protein 84 26 411 IPR028015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02173 Vivi-Chr3 35939734 35944858 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02173 K26160 - mtr:25486600 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02173 3 35939734 35944858 Vivi3g02173 3 35939734 35944858 ECH