Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02170 ATGAGAAGGCCATTGAAACAACCACACAAGAATGAAGAAAACCTCTTCGAAGAATTACCAGATGATGTCGTCGTCTTCATCCTCACGAAGCTCAGTTCAACTGCCTCTTCATCTTCCCATTTCCTCAACATTCTCTCAACATGCAAGAGATTCAAACAGTTAGGTCTTCATCCTTTGGTTTTATCGAAAGCGGGGTCTAAAGTTCTTTTCGTTCACCCTAAAAAATGGTGTGATAACTCTCACCGTTTTCTTAAACGCTGTGTTGACGCCGGTAGCGTGGAGGCTTTTTATACTCTTGGAATGATCCGATTTTATTGTCTTCAAAATCGAAAGAGTGGACTATCCCTAATTGCGAAGGCAGCAATGAAGATGCACGCGCCGGCGCTTTACTCACTCGCTGTGATTCAGTTCAACGGAAGCGGTGGCTCTAAGCACGACAAAGATCTACGCGCTGGAGCGGCACTTTCTGCACGCGCGTCGTCACTCGGCCACATCGACGCGCTTCGTGAGTTTGGCCATTGTCTTCAAGACGGTTACGGAGTGAAACAGAACGTTACCGAAGGACGACGGTTGTTGGTGCAGGCTAATATTAGAGAACTGTTGCTAGTCTTACGCGCAGTTGTGGCGGAGTCGCCTTCACGCGCTGGTTTCTGTCAGGAAGCTTTGCGGAGTTTGAAAAACCTGGCTGTGCCTTTGATAAATACTAGCAATAACGATGAAAATGGTTACAACGTGACGGTGCCGGAGGTGCATCCGGTGAACTGGTTTTTGAGGCAGTGGTTTGAGTCTGGGAGAGGCACTTTGGAGGAAGGGTTGAGACTGTGTGCGCATATTGGATGTGGCCGTGTGGAGATGCGGCCGCATGAGTTTCGGCGGTGCTCCGTTTGTGGTACGGTGAATTACTGCTCCCGTGGTTGTCAGTCACTCGACTGGAAACTGCGGCATAAAATGGAGTGTTCGCCGTTAGAAGGGTGGTTGGACGAGAATAACGGCGGTGGTGATGATGGTCCTTTAGTCGGTGGCGGCGGCGGCGACGAGAATCATGGGAATGACGTGGCGGTCTAG 1065 0.4995 MRRPLKQPHKNEENLFEELPDDVVVFILTKLSSTASSSSHFLNILSTCKRFKQLGLHPLVLSKAGSKVLFVHPKKWCDNSHRFLKRCVDAGSVEAFYTLGMIRFYCLQNRKSGLSLIAKAAMKMHAPALYSLAVIQFNGSGGSKHDKDLRAGAALSARASSLGHIDALREFGHCLQDGYGVKQNVTEGRRLLVQANIRELLLVLRAVVAESPSRAGFCQEALRSLKNLAVPLINTSNNDENGYNVTVPEVHPVNWFLRQWFESGRGTLEEGLRLCAHIGCGRVEMRPHEFRRCSVCGTVNYCSRGCQSLDWKLRHKMECSPLEGWLDENNGGGDDGPLVGGGGGDENHGNDVAV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02170 354 ProSiteProfiles Zinc finger MYND-type profile. 277 319 IPR002893 -
Vivi3g02170 354 MobiDBLite consensus disorder prediction 326 354 - -
Vivi3g02170 354 Gene3D - 265 322 - -
Vivi3g02170 354 SUPERFAMILY HIT/MYND zinc finger-like 273 324 - -
Vivi3g02170 354 SUPERFAMILY HCP-like 76 195 - -
Vivi3g02170 354 PANTHER MYND DOMAIN-CONTAINING 6 332 IPR044508 -
Vivi3g02170 354 Pfam MYND finger 280 319 IPR002893 -
Vivi3g02170 354 Gene3D Tetratricopeptide repeat domain 72 205 IPR011990 GO:0005515
Vivi3g02170 354 FunFam Predicted protein 267 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02170 Vivi-Chr3 35868394 35870680 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02170 - - cam:101501389 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02170 3 35868394 35870680 Vivi3g02170 3 35868394 35870680 ECH