Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02122 ATGGCATTCTCTAGTGCTTTGCTTTTGTGCTTCTTTTTAGCATTCAACATGGCACTTCCAACCCTTGCAACTGTCTACACTGTTGGAGATGCTTCAGGTTGGGTAATTGGTGGTGATTATAGCACATGGGCTAGTGACAAAACCTTTGCAGTTGGTGATAGCCTCGTGTTCAACTATGGAGGTGGCGCGCACACAGTGGATGAAGTTAAAGAAAGTGACTACAAATCATGCACATCTGGAAACTCAATTAGCACAGACAGTAGTGGTGCCACAACCATTGCTCTTAAGAAAGCAGGCAAACATTACTTCATTTGCGGTGTTCCTGGACATTGTACCGGTGGCATGAAACTTTCCATTAAGGTTAAGGCCTCTTCTGGTTCTTCCGCTGCTCCTTCTGCAACACCATCATCGTCAGCAAAAGGTTCACCTTCTTCTGATGGCACCCCCGCCACACCCTCCACTACTACTACTCCTACTAAGCAAAATGAATCTTCAGCTACAAGTCTCTCACCAATTGTTGCTTTGGTTTTTACTGTTTCATGGATTTGTAGCTATGTTTTGGTATGA 567 0.4444 MAFSSALLLCFFLAFNMALPTLATVYTVGDASGWVIGGDYSTWASDKTFAVGDSLVFNYGGGAHTVDEVKESDYKSCTSGNSISTDSSGATTIALKKAGKHYFICGVPGHCTGGMKLSIKVKASSGSSAAPSATPSSSAKGSPSSDGTPATPSTTTTPTKQNESSATSLSPIVALVFTVSWICSYVLV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02122 188 MobiDBLite consensus disorder prediction 127 165 - -
Vivi3g02122 188 CDD Phytocyanin 24 121 - -
Vivi3g02122 188 Gene3D - 22 128 IPR008972 -
Vivi3g02122 188 Pfam Plastocyanin-like domain 38 115 IPR003245 GO:0009055
Vivi3g02122 188 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Vivi3g02122 188 FunFam Blue copper 22 127 - -
Vivi3g02122 188 SUPERFAMILY Cupredoxins 23 121 IPR008972 -
Vivi3g02122 188 PANTHER BLUE COPPER PROTEIN 23 135 IPR039391 GO:0009055
Vivi3g02122 188 ProSitePatterns Type-1 copper (blue) proteins signature. 99 115 IPR028871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02122 Vivi-Chr3 34915552 34916712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02122 5 130 Miscellaneous Gene Families AT1G22480 53.968 2.78e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02122 - - vvo:131660963 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02122 3 34915552 34916712 Vivi3g02122 3 34915552 34916712 ECH