Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02114 ATGGCCCAACAAAAGAAAAGGCTCAAAACTCTCACAAACATTCTCAAAGACAAAGCTTCAGTGATCATCGCATCCCTCTCCGTCAAACGCCACGTGTCCTCCGTCCACATCAACATCCTCCGCGCCACCTCCCACACCCTCTCCTCCCCACCCTCCGAGTCACAAATCGCCGCCGTCCTCTCCATCGGCAACACCTCCTACACTCTCCCTCGCGCCTGCATCATCTCCCTCATGGACCGTCTCCACGGCACCAAAAACGCCACCGTCGCAATGAAATGTCTCTTCACTCTCCATAACATAATCCTCAAAGGACCTTTTACGCTGAAAGATCAATTCTCCTGTTACCCTTCTTACGGCGGTCGGAATTTTCTTAACCTCTCGACTTTTCGCGATGACTCGGATTTTGAATCGGTGCAGTTGAGTTCTTGGGTTCGTTGGTACAGTGCTGTTCTTGAACAGTTTTTAACCATTTCAAGAATATTAGGTTATTACATGAATTCGGTAAAGAATGATTTGGATTCGGTTTCGGTTATGATGATGAAGTTGACGAATGCTGATTTGCTGTATAAGCTTGAAGGATTGATTGTTTTTGTTGAGAAAATTAGTGATTTTCCGGAATCGTTGGATCTTCAGAGGAATGAACTGGTTTATGAGATAGTGAGAATGGTGGGAGAAGATTATAGAAACGTGCAGGGTGAGATATTGATGAGATTGGAGGAGATTGGGAAGAGGGTAGAGAGAGTTGAGGATGTGGGTGAGTTGAACGAGTTGGTGAGTTATTTGAGGAGATTGGAAGAGAGTAGAGAGAAACTGGTGGTTTTGTTTGTGAATAGAAGGAAGAATAATGGGTTTTGGGAGATGGTTAGAGAGATGAAGATGAGAGGGGTGGAGAAGAAGGAGGAGATTGAAGGGAAGTGGCTTACGGTGGTGGGGAAGAGAAACACGGCGGCGGCGGCGGCTGAGTTGACTCGGTGTACGAACCCGTTTCTTGAACCGGGACAATATTTTCCGGTCCCACAGTTGAGTTTTGCAACGGTAAGATGA 1044 0.4655 MAQQKKRLKTLTNILKDKASVIIASLSVKRHVSSVHINILRATSHTLSSPPSESQIAAVLSIGNTSYTLPRACIISLMDRLHGTKNATVAMKCLFTLHNIILKGPFTLKDQFSCYPSYGGRNFLNLSTFRDDSDFESVQLSSWVRWYSAVLEQFLTISRILGYYMNSVKNDLDSVSVMMMKLTNADLLYKLEGLIVFVEKISDFPESLDLQRNELVYEIVRMVGEDYRNVQGEILMRLEEIGKRVERVEDVGELNELVSYLRRLEESREKLVVLFVNRRKNNGFWEMVREMKMRGVEKKEEIEGKWLTVVGKRNTAAAAAELTRCTNPFLEPGQYFPVPQLSFATVR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02114 347 FunFam Putative clathrin assembly protein At4g40080 7 164 - -
Vivi3g02114 347 PANTHER CLATHRIN ASSEMBLY PROTEIN 10 312 IPR045192 GO:0048268|GO:0072583
Vivi3g02114 347 Pfam ANTH domain 36 194 IPR011417 GO:0005543
Vivi3g02114 347 CDD ANTH_N_AP180_plant 36 158 - -
Vivi3g02114 347 Gene3D - 6 164 IPR008942 -
Vivi3g02114 347 SMART enth_2 33 165 IPR013809 -
Vivi3g02114 347 ProSiteProfiles ENTH domain profile. 27 165 IPR013809 -
Vivi3g02114 347 SUPERFAMILY ENTH/VHS domain 34 162 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02114 Vivi-Chr3 34762034 34763404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02114 - - gmx:100788852 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02114 3 34762034 34763404 Vivi3g02114 3 34762034 34763404 ECH