Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02102 ATGGCAGAAGAAATGGAACAAGAAACTACAGACAGAAAAATGAAGAGAATTCTTCTCATAATCAACTGTTTATTATTAGCCTTAGGAAACTCCGGAGGTCCCCTCATAATGCGTCTCTACTTCATCCACGGCGGCAACCGCGTCTGGCTCTCCAGTTTCCTCGAAACCGCCGGTTTCCCGCTAATGATCCTCCCCCTCACAATCTCATACATAAACCGCCGCCGTCTCCACCTAAGTCAACCACCATCAACCACCGCCGAACCCGCCGCAAAGCTAAAAATAATCTCCATGGAACCTCCCGTCTTCTTCGCCGCGGCTCTCATGGGAATCCTCACCGGCCTCGACGACTATCTTTACGCGTACGGTGTTGCTCGGCTTCCAATTTCCACTTCTGCTTTGATAATCGCTTCTCAGCTTGGTTTCACCGCGGTTTTCGCTTTTCTGCTTGTGAAACAGAAATTTACTTCATTCTCTGTAAACGCCGTCTTTTTGCTTACGGTTGGAGCAGCAGTTTTGGCTTTGCATACATCCGGAGATCGACCTGCCGGTGTTTCTAAGAAGCAATATAATATTGGTTTTTTCACTACTCTTGCTGCTTCTGCATTGTATGGATTTGTTTTGCCTTCAATTGAATTCATTTATAAGAAAGCCAAACAAAACATTACATATTCTCTTGTTATGGAAATTCAGTTTGTTATCGGTTTGTTTGCTACTCTCTTTTGCACGGTCGGCATGATAGCAAATAACGACTTTAAGGTGATTCCTAGGGAAGCAAGGAATTTTGGACTAGGGGAAAAGACATACTATGTGGTGTTGGTGATGAGTACAATGTTTTGGCAAGCGTTTTTCTTGGGAGCAATTGGAGTTATTTTTTGTGGTTCATCTTTGTTATCGGGTATTTTGATAGCTGTTTTCTTGCCGGTAACTGAAGTGTTGGCGGTAATATTTTATAAAGAGAGATTTCAAGCAGAGAAAGGGGTTTCTCTTGTGCTTTCTCTTTGGGGGTTTGTGTCTTATTTCTATGGTGAGGTTGAACAAGATAAGGAAAAGAAGAAGAAACGTGCTGTGGAGACAGAGATGGGTCATAGTCTTGAAGTACTACCTGCTCCGTGA 1113 0.4349 MAEEMEQETTDRKMKRILLIINCLLLALGNSGGPLIMRLYFIHGGNRVWLSSFLETAGFPLMILPLTISYINRRRLHLSQPPSTTAEPAAKLKIISMEPPVFFAAALMGILTGLDDYLYAYGVARLPISTSALIIASQLGFTAVFAFLLVKQKFTSFSVNAVFLLTVGAAVLALHTSGDRPAGVSKKQYNIGFFTTLAASALYGFVLPSIEFIYKKAKQNITYSLVMEIQFVIGLFATLFCTVGMIANNDFKVIPREARNFGLGEKTYYVVLVMSTMFWQAFFLGAIGVIFCGSSLLSGILIAVFLPVTEVLAVIFYKERFQAEKGVSLVLSLWGFVSYFYGEVEQDKEKKKKRAVETEMGHSLEVLPAP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02102 370 Pfam Purine nucleobase transmembrane transport 17 348 - -
Vivi3g02102 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 97 176 - -
Vivi3g02102 370 PANTHER OS09G0467300 PROTEIN-RELATED 6 354 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02102 Vivi-Chr3 34637868 34639539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02102 14 352 Organic Solute Cotransporters AT1G28220 56.637 2.17e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02102 - - gmx:100803818 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02102 3 34637868 34639539 Vivi3g02102 3 34637868 34639539 ECH
Vivi7g01233 7 63395591 63397282 Vivi3g02102 3 34637868 34639539 PCT
Vivi3g02102 3 34637868 34639539 Vivi7g02803 7 92286275 92292892 PCT