Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02051 ATGAAGCTTCATCCTTTGAGCCAAATCAACCACTCTCAGAAAACCGCTTTTCTCGGTGTTTTCCTCTCAGCGTTGCCATTTTTCTTTCCCAATCTCTTCCAACCTCTCGCTCGTGCTTCCCCTTCCATGTTCTCCGAATGGGTTGCTCCTAAACCTAGGCACGTCACATTGCTAGAGGGTGCTCTGCAACACAAAACTTCTCTTCAAGTACAAGCTAATGTATGGGCTCCCCTGCCTTTCCAAGGATGGAAACCTTGTGCCATGGATCCAAAATCACCCTCACTGCCCGAAAAATCTCAGGGTTATATTCAAGTTTTCCTTGATGGAGGATTGAACCAGCAGAAGATGGGGATATGTGATGCAGTAGCTGTTGCTAAAATTTTGAATGCAACGTTGGTGGTTCCGCATTTTGAAGTGAATCCTGTTTGGCAAGATTCAAGTTCATTTGCAGATATATTTGATGTGGATCACTTCATTGATGTTCTCCGTGATGAAGTATCTATAGTGAAAGAGCTTCCTAGTGAGCACTCTTGGAGCACAAGGGAGTACTATGCCACGGGCATCAGAGATACTAGAATTAAAACAGCACCAGTTCAAGCTACTGCGGAGTGGTATATAGAAAATGTATTGCCGGTACTTCAGAGTTATGGTGTTGCTGCTATTGCACCGTTCTCTCATCGCTTGACATTCAACGGCTTACCAACTGACATCCAGCGTCTCCGTTGTAAGGTCAACTTTGAAGCATTGAACTTTGTTCCTCATGTCCAGGAATTAGGAAGTATCATTGTTCAGCGCCTTCGCTACAATGCTACTGTCGACCAAGCAGAAGCAAATGACTATTTGCTTGAGGAAACCCATAAGCTAGGAAAACGGCAAAGCGGGAAGTTTATTGTGTTGCATCTGCGTTTTGATAAAGATATGGCTGCCCATTCAGCCTGTGATTTTGGTGGGGGTAAAGCTGAGAAACTTGCTCTAGCTAAATACAGGCAGGTGCTTTGGCAGGGAAGAGTATTGAATTCTCAATTCACCGATGAAGAGTTGAGAGGTCAGGGGCGTTGCCCACTGACTCCAGAAGAGATTGGATTGCTCCTAGCTGCTTTGGGGTTCAACAACAGAACACGGCTCTATCTTGCTTCCCACAAGGTTTATGGTGGAAAAGCTAGGTTGGAAACTTTAAGCAAGTTATTTCCTTATATGGAAGATAAGAAGAGTCTAGCCTCTGAAGAGAAACTTGCCAAGGTTAAAGGAAAGGCATCACTATTAGCTGCTGTTGATTATTATGTGAGCATGCACAGTGACATATTCATTTCTGCTTCTCCAGGCAATATGCACAATGCTCTGGTGGCGCATCGGTCTTATGCAAATATGAAGACTATCAGACCAAGCATGGGACTTTTGGGCCAGCTATTTCAGAACAAGAGCATGAGCTGGTCAGAGTTTCAGCGTGCTGTTCTTGATGGGCATAAGAACAGACAAGGGCAGATAAGATTAAGAAAGGAGAAGCAATCAATATACACCTATCCAGCTCCTGATTGCATGTGTAGAGTTTGA 1551 0.4429 MKLHPLSQINHSQKTAFLGVFLSALPFFFPNLFQPLARASPSMFSEWVAPKPRHVTLLEGALQHKTSLQVQANVWAPLPFQGWKPCAMDPKSPSLPEKSQGYIQVFLDGGLNQQKMGICDAVAVAKILNATLVVPHFEVNPVWQDSSSFADIFDVDHFIDVLRDEVSIVKELPSEHSWSTREYYATGIRDTRIKTAPVQATAEWYIENVLPVLQSYGVAAIAPFSHRLTFNGLPTDIQRLRCKVNFEALNFVPHVQELGSIIVQRLRYNATVDQAEANDYLLEETHKLGKRQSGKFIVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVLWQGRVLNSQFTDEELRGQGRCPLTPEEIGLLLAALGFNNRTRLYLASHKVYGGKARLETLSKLFPYMEDKKSLASEEKLAKVKGKASLLAAVDYYVSMHSDIFISASPGNMHNALVAHRSYANMKTIRPSMGLLGQLFQNKSMSWSEFQRAVLDGHKNRQGQIRLRKEKQSIYTYPAPDCMCRV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02051 516 CDD O-FucT_plant 102 459 IPR024709 -
Vivi3g02051 516 PIRSF UCP009360 2 516 IPR024709 -
Vivi3g02051 516 Pfam GDP-fucose protein O-fucosyltransferase 102 453 IPR019378 -
Vivi3g02051 516 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 15 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02051 Vivi-Chr3 33843441 33848006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02051 74 514 Miscellaneous Gene Families AT1G22460 33.623 1.50e-84 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02051 - - gmx:100802582 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02051 3 33843441 33848006 Vivi3g02051 3 33843441 33848006 ECH