Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02033 ATGCGTGTCACCGGGGATTTAGGGTTTTCGAACCTAGTCCTTGTGGTGGTTTGTGTGGTTTTGCCTGTGATTGGTTTTGTGATTCACCGGAAATGGCAGGTTGCGGTGGCTAGGAATGAGGAGATCAAGAGGCTTTTGATTTTGGCTGCTGAGGAGACTGAGAGGGTTGAGAGAGAGGCGTTGTATGTGTCTGCTCCGGTGGTTTTGGCTACTGCTAACAATTATCAATGTGCTCTCTGTTATTTTCCGGCCACTGCAAGATGTGCTAAGTGCAAATCTGTCCGTTACTGTTCTACTCATTGCCAAACCGTTCATTGGCGTCAAGGTCATAGATTTGAATGTCTTCCTCCCAGCAAAACACATCAGAGCGATGGGGGAATAAGTGGTATTGACAAGAGGGAAGTGGAGCAAGATTACTCTGTTATCCATGAGGAGAAATCTGAAAAAAGAGGTACAGAGTGTAAAATACCATTTGAAGGTACCATCTTTTCTCCCAAGGTTTCATTTGGAAAGGATGATAATATTAGCGCTGAGTTCCTTGCAGAGGAAAGTTTAGCAGATACTAATTCTGAATTATCTAGTAACTCATTTTCTGGATTTTCGGCTTCCCCGAGTTCTAGTGATTCATCGGATGATTCCTCTGTCTGTGAGAGTATTGTCTCAAGTGAGCATGACCGATCAGAGGGACCTATTTCTTTTGTTCCCACCCTTGACATGACTGATAAAACCACAAGCAATAGCAATGGGGATGCAGCAATGTCTTCTTCTCCAAAGTTTGCTAGTTTGCTTGATTCAGTTGGTGGTTCTTCTACAGTTCATAAATTAAATCATATCACACCTGGTTCTAGTAAAGAAGCGAGGGAGCTTGTGTCAAATGGTGCTTCAGGCTCAAGCGTGTGGAAGGGTGTGAAGATTGAGCCTTCTGGATTCTGGGATAAAGCTATTGATTCAGGAGGGATTAGAGATCACACTAGTAATAAAACTTATCCATCCCATTCTGATGAATCCACTTGTGGAAAGGCTGATTCTGGATTGTCATTCCGCTTTCAATTTGGCACCGTGCCTCCTTTGCATGTACGAGATACTGAGGCTAAGGAATCTTTGCCTGATGACACTCTTCCAAACTTTTTTAGGAAGAATATGCCACATTCAGGATCAGCATCATCTGAAAACAACAACATGAATTCTTTAAAGGCAGGGAACCCCTCATTCACCGATGGTGGAGATCCCAATTTTATTAGCAAAAGTCGCAGTGGTTCTGCATCTGATCAATTAGAATCTAAAGACAGCTCTGAGACACCTCTACATTCCTTTTCTTCTCAATCCCCCAGCATTGGCAAAGATCCAGGTTCTGCAGATACTAGGAGCATCCATAACTTGCAACCATCTGGCTCCGTGGCATCAAATCATGTTGTGGACAACCATGGCTGCACCTCTAAGTCCACCGATGTTATGTGCAAGGCACACGAGCTTGCTGATTCTAAATTAGCTTCTACAAATGAAAGACATTCACAACCAAGTACAAAACATAGGAATAATGACATTGAATATGGAACTGTCACTTCTTCTCATGTTAGCTATTCTGTTAATTCTAAGAGTGGCTTGAAAACATCTGTTTTAAAAGTCGTTGATCAGATTAGAGGATCAAATTTGTCAAAGCACACTCCTTTAGCCCTTGGGGGGGATATTGCTGGAAAATGCAATAACAAGGGTCTTTTTCCATATGAATCATTTGTCAAGCTTTATAACTCTAACAAGGTGGAGTTGTGCCCGTTCGGTCTTATAAATTGTGGAAACAGTTGTTATGCTAATGCTGTACTTCAGTGCCTAGCTTTTACTCCACCCTTAACTGCTTATTTTTTTCAAGGACTACATTCTAAATCATGTGCAAATAAAAAGTGGTGCTTCACGTGTGAATTTGAAACTTTGATTTTGAAGTCAAAGGACACAAAATCCCCACTATCTCCAATGAGCATACTTTCTCAATTACAGAGTATTGGGAGTCAGCTTGGTAATGGCAAAGAAGAAGATGCACATGAATTTATAAGACATGCTATTGACACAATGCAATCTGTTTGCCTTATGGAAGCTGGGGTTAATGCATCGGGTTCATTGGAAGAGGACACTACTTTAATTGGTCAAACATTTGGAGGATACCTTCGTTCAAAGATAAAATGCATGAAATGTGGTGGGAAGTCTGTGCGCCAGGAAAGGATGATGGATCTAACTGTTGAGATAGAAGGGGAGATATCAACACTTGCGGAGGCCCTTCGACGTTTCACAAGCACTGAGACTTTGGATGGAGAAAATAAGTACCACTGTGTCAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCTAATATTCTTACAGTTGCATTAAAGAGATTTCAGTCTGGAAAATTCGGGAAGCTCAACAAGCCTATTCAATTTCCTGAAATACTTGATCTAGCGCCTTTCATGAGTGGGTCTAGTGATAAGACACCTGTATACAGATTGTATGGTGTGGTTGTTCATTTGGATATTATGAATGCTTCTTTTTCAGGGCACTATGTGTGCTACTTGAAGAATATCCAAAACAAGTGGTTCAAGGTTGACGACAGTGTGGTGACAGCTGTTGAAGTAGAGAGAGTCTTAACAAAAGGAGCATATATGCTTTTTTATGCAAGGTGCTCTCCAAGGGCCCCTAAATTAATTAGGAACATGATACTATCCCAAGATTCAAAAAGCAAGGTCAATGGAAAGTCTCCTACAACGAAAGCAAGATCTGCATCGTCAAATTCTGGTGCAGCTGAACCCATCAGTAGTTCAGTTTCTTCAGACAGCTCACCCACCTTGGAGTCTTTCTATTCAAGGTTTCACCACCTGAAAAAGGTTTTAGAAGAAGACTCATCAAGTGATAGTTCATCCCTTTTCAGCAGCAGTAATTCTGATGAACTTTCTTGCAGTACTGATAGTACCCGTGATTCAACTAGCATGGACGACTTCTCCGACTATCTTTTTGGTGATTCAGGGCATGGATGGAGTAGCCCGTGGAGGAATTCTGATTCCGACTCGTCCTCATCCTCTCCCTTGAATTACAGACATTCACCCCTATCTGACATGGGCAAGTATGATTCAGTGTCTCCAGATACAACTAGCTTGCGAATTCCCACATGTTCAAGTGTGAATTCTGATACAATTTTACAGAATAAAAAGTTAGATAGTAGTAGCATTAGCGGCAATAGGAGTAGTAGGGATGGTGACTCGTCTCTGAAAGTAGGATCTAACCATTCAAATGATAAGAACTCTGGTGTATCGAGTAGAAAGTCAAGGAAAAGAACGGATTGA 3348 0.4161 MRVTGDLGFSNLVLVVVCVVLPVIGFVIHRKWQVAVARNEEIKRLLILAAEETERVEREALYVSAPVVLATANNYQCALCYFPATARCAKCKSVRYCSTHCQTVHWRQGHRFECLPPSKTHQSDGGISGIDKREVEQDYSVIHEEKSEKRGTECKIPFEGTIFSPKVSFGKDDNISAEFLAEESLADTNSELSSNSFSGFSASPSSSDSSDDSSVCESIVSSEHDRSEGPISFVPTLDMTDKTTSNSNGDAAMSSSPKFASLLDSVGGSSTVHKLNHITPGSSKEARELVSNGASGSSVWKGVKIEPSGFWDKAIDSGGIRDHTSNKTYPSHSDESTCGKADSGLSFRFQFGTVPPLHVRDTEAKESLPDDTLPNFFRKNMPHSGSASSENNNMNSLKAGNPSFTDGGDPNFISKSRSGSASDQLESKDSSETPLHSFSSQSPSIGKDPGSADTRSIHNLQPSGSVASNHVVDNHGCTSKSTDVMCKAHELADSKLASTNERHSQPSTKHRNNDIEYGTVTSSHVSYSVNSKSGLKTSVLKVVDQIRGSNLSKHTPLALGGDIAGKCNNKGLFPYESFVKLYNSNKVELCPFGLINCGNSCYANAVLQCLAFTPPLTAYFFQGLHSKSCANKKWCFTCEFETLILKSKDTKSPLSPMSILSQLQSIGSQLGNGKEEDAHEFIRHAIDTMQSVCLMEAGVNASGSLEEDTTLIGQTFGGYLRSKIKCMKCGGKSVRQERMMDLTVEIEGEISTLAEALRRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNILTVALKRFQSGKFGKLNKPIQFPEILDLAPFMSGSSDKTPVYRLYGVVVHLDIMNASFSGHYVCYLKNIQNKWFKVDDSVVTAVEVERVLTKGAYMLFYARCSPRAPKLIRNMILSQDSKSKVNGKSPTTKARSASSNSGAAEPISSSVSSDSSPTLESFYSRFHHLKKVLEEDSSSDSSSLFSSSNSDELSCSTDSTRDSTSMDDFSDYLFGDSGHGWSSPWRNSDSDSSSSSPLNYRHSPLSDMGKYDSVSPDTTSLRIPTCSSVNSDTILQNKKLDSSSISGNRSSRDGDSSLKVGSNHSNDKNSGVSSRKSRKRTD 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 192 217 - -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 1014 1035 - -
Vivi3g02033 1115 Pfam Ubiquitin carboxyl-terminal hydrolase 592 894 IPR001394 GO:0004843|GO:0016579
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 192 254 - -
Vivi3g02033 1115 Gene3D Cysteine proteinases 585 908 - -
Vivi3g02033 1115 Pfam MYND finger 77 114 IPR002893 -
Vivi3g02033 1115 ProSitePatterns Zinc finger MYND-type signature. 77 114 IPR002893 -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 379 474 - -
Vivi3g02033 1115 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 592 897 IPR028889 -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 358 474 - -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 915 950 - -
Vivi3g02033 1115 SUPERFAMILY Cysteine proteinases 588 900 IPR038765 -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 971 996 - -
Vivi3g02033 1115 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 593 608 IPR018200 GO:0004843|GO:0006511
Vivi3g02033 1115 FunFam Ubiquitin carboxyl-terminal hydrolase 15 586 905 - -
Vivi3g02033 1115 FunFam Ubiquitin carboxyl-terminal hydrolase 15 68 118 - -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 1014 1115 - -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 1045 1103 - -
Vivi3g02033 1115 Coils Coil 39 59 - -
Vivi3g02033 1115 ProSiteProfiles Zinc finger MYND-type profile. 77 114 IPR002893 -
Vivi3g02033 1115 MobiDBLite consensus disorder prediction 237 254 - -
Vivi3g02033 1115 SUPERFAMILY HIT/MYND zinc finger-like 73 116 - -
Vivi3g02033 1115 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 413 900 - -
Vivi3g02033 1115 Gene3D - 64 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02033 Vivi-Chr3 33671942 33678934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02033 495 953 Miscellaneous Gene Families AT4G31670 42.431 2.37e-122 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02033 K11855 - gmx:100793079 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02033 3 33671942 33678934 Vivi3g02033 3 33671942 33678934 ECH