Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02022 ATGACCAACACAAGTGCTGAATTGTCTCAGGGAAATAATGGCGGTGCTTCGATTCCCCCTCCTAATTCCCAGCCTGGACCACCAGAGCATCAGCCTTCTCGTGGTTCCGGAAACAATGCGATTTTCAAGAGTGGGCCGCTTTTTATATCTTCCAAAGGAATTGGATGGACATCCTGGAAGAAAAGATGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCGAATGCTGTCCCTCTAAAGGGAAATGAAGTGAATTTGACCCTTGGTGGCATTGATCTCAACAATTCAGGCAGCGTCATTGTTAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCCGATGGTCATGATGGACGGGCATTCACACTTAAGGCTGAAACTACCGACGACTTGTACGAGTGGAAGATTGCACTCGAGAAAGCTTTGGCACAAGCACCAAGTGCTGCCAATGCGTCGGAGCAAAATGGTATCTATAGGAACGATCAGACTGATCCAATTGATATTTCTTTGGACCAGTTGAAGGATAGAGAACCAGCCAAATCTACGGTAATTGGCCGACCAATTTTACTTGCTTTGGAGGATGCTGATGGAACTCCATCGTTTTTGGAGAAAGCGCTGAAATTTATGGAAGAGCATGGAGCTAGCGTAGAAGGGATCCTGCGACAAGCAGCTGATGTTGATGATGTTGAACGTCGCGTTCGGGAATATGAACAAGGAAAAACTGAGTTTGCTCCGGATGAAGATGCACATGTCATCGGTGATTGTATAAAGCATGTTATTCGGGGATTGCCATCTTCTCCGGTCCCTGCATCTTGCTGTAAGGCACTGTTAGAAGCTTGCCGAACCGAACGTGGTGTTAGAGTTGCTTCTATGCGCGCAGCAATAAATGACACTTTCCCTGAACCAAATCGCCGCTTATTGCAAAGAATACTGTTGATGATGCAAACTGTGGCTTCACAAAAAGCTGTAAACAGAATGAGTTCCTCAGCTGTGGCAGCTTGCATGGCACCATTACTTCTTCGCCCCCTTCTAGCCGGAGAATGTGAGATCGACAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTCTACAAGCAGCTGCAGCGGCTAACCATGCCCAAGCAATTGTTATAACCTTATTAGAAGAATATACCAGCATATTTGGGGAAGGTTCCGTGTCCCCTGATATATACACCGACTCAGAAGAGAGTGGATCTGAGAGTGAGGAAGGTACTGACGATGATCTATCCTATGATGATGATGATGATGATTATGACGATGAATCAGTGCACGAATCTGATGAAGATGATCTTGTCAGCGAATCCTACACTGAAACTGGAGATTCTGAGGCTGATGATTACGATGACAAGGATCATGATCATTCTCATTCAAGTTCAAAATCCTCAGATGCGAGTGATGATGCTAAAGTCAATCAAATGATAACAAAGTCACGTGAAGGCTCACCGACTGAACATGAAAATACCAAAAGTATTGAAAATCTCACGAGTCCAAAGAATGCAGCTAATACAGTTATACCCAATAAGCCTGTTGAAACTTCCCCTGATCTATCCGGTATGCATAATTCATATTCCCCTAGCCAATCCCATATGAAAAAATCTGCTACCATGTCCAATGGCCCAGCACCTCGCCACCGAAACATGTTGGGGCGCACCTCTGCAAGGAAGAACTTATCTATGGAATCCATTGACTTTCCTCTTGAAGAGGATGATGAAATCGAAAGACTTGAAGTTGCTAAGACAGAACTACAAAACCAAATTGCAGACGAGGTGAAGGAAAACGAAAAGATGCAATCAAAGATAGATGACCGAAAGAAAGACTTGCAAGAGCGGCGTTTGGCACTTGAGCAAGATGTGGCTAAACTACAAGAACAGTTACACAAGGAGAAGAGTTCTCGGGCAACTGAGACCAGGGTAGAACTTCAGGAATTAGCTCTGGTAGAAGTGGATCTTTCCAACTTAGAGCGGATGGTTGAGGAGCTTGGGCAGCGGCTTAATGTTAAACTCGAGCATAAATATCGATCTACTTCAAATGTCAGGAAGACATCGCGGCAATTATCAAATCAGGAAAGAAAAATGAAACATAAGGGAGATGCTGATGTTTCTGCGACATCACAATATGAAAGGTCAATGAGTAAGGACTCTTATCTTAGTGGAGGGGAAAGTGATTCTGAGAGAAAGGCAGAGTCGACACCCTTACAAAACAAACAGCCACCAACATCCAAGAGATCTACTTCAAGGGGTGAGGGAGCAAATACTTCTGCACTCACAAAACTGACATCCAGGCTGAACTTTTTGAAGGTGGGCCGAAGTCAAGCTGTAAATGAACTACAAAACGCGGATAGAGGCCGAGACTCGAGTCACTCTTCGCGCAACCAAGATAAAGGAAAAGGATCTGAACGTCACCAAGCACTTCCTTCCCCGAGACAGAACCCAGAAAAAGGTAGAGTCATGGACAGTTCCAAGTCACTCGAAAAAGGGTCGAGCAAAGGTAAATCTCATCAAAGTTCAGAGAAACTAAGAAAGTCAGACAGTCAGCCAGGCTACCACTCAGAAGGATGGGATCAACATCCAACTTACTTAGAAAGAGGAAGGTCAGAAGGGCATCATCAGTCTTTCAACGTGGATAAAGGTCGATGA 2673 0.4418 MTNTSAELSQGNNGGASIPPPNSQPGPPEHQPSRGSGNNAIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVPLKGNEVNLTLGGIDLNNSGSVIVKADKKLLTVQFPDGHDGRAFTLKAETTDDLYEWKIALEKALAQAPSAANASEQNGIYRNDQTDPIDISLDQLKDREPAKSTVIGRPILLALEDADGTPSFLEKALKFMEEHGASVEGILRQAADVDDVERRVREYEQGKTEFAPDEDAHVIGDCIKHVIRGLPSSPVPASCCKALLEACRTERGVRVASMRAAINDTFPEPNRRLLQRILLMMQTVASQKAVNRMSSSAVAACMAPLLLRPLLAGECEIDNDFDVGGDGSVQLLQAAAAANHAQAIVITLLEEYTSIFGEGSVSPDIYTDSEESGSESEEGTDDDLSYDDDDDDYDDESVHESDEDDLVSESYTETGDSEADDYDDKDHDHSHSSSKSSDASDDAKVNQMITKSREGSPTEHENTKSIENLTSPKNAANTVIPNKPVETSPDLSGMHNSYSPSQSHMKKSATMSNGPAPRHRNMLGRTSARKNLSMESIDFPLEEDDEIERLEVAKTELQNQIADEVKENEKMQSKIDDRKKDLQERRLALEQDVAKLQEQLHKEKSSRATETRVELQELALVEVDLSNLERMVEELGQRLNVKLEHKYRSTSNVRKTSRQLSNQERKMKHKGDADVSATSQYERSMSKDSYLSGGESDSERKAESTPLQNKQPPTSKRSTSRGEGANTSALTKLTSRLNFLKVGRSQAVNELQNADRGRDSSHSSRNQDKGKGSERHQALPSPRQNPEKGRVMDSSKSLEKGSSKGKSHQSSEKLRKSDSQPGYHSEGWDQHPTYLERGRSEGHHQSFNVDKGR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02022 890 MobiDBLite consensus disorder prediction 407 458 - -
Vivi3g02022 890 CDD PH 43 138 - -
Vivi3g02022 890 Pfam PH domain 43 146 IPR001849 -
Vivi3g02022 890 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 724 803 - -
Vivi3g02022 890 SMART PH_update 41 149 IPR001849 -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 685 767 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 1 19 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 499 547 - -
Vivi3g02022 890 Gene3D Rho GTPase activation protein 171 394 IPR008936 -
Vivi3g02022 890 Gene3D - 30 148 IPR011993 -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 696 713 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 826 859 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 1 38 - -
Vivi3g02022 890 Pfam RhoGAP domain 203 346 IPR000198 GO:0007165
Vivi3g02022 890 MobiDBLite consensus disorder prediction 742 767 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 792 813 - -
Vivi3g02022 890 SUPERFAMILY PH domain-like 16 147 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 459 475 - -
Vivi3g02022 890 ProSiteProfiles PH domain profile. 40 147 IPR001849 -
Vivi3g02022 890 Coils Coil 584 643 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 476 490 - -
Vivi3g02022 890 CDD RhoGAP 203 341 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 396 574 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 786 890 - -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 867 890 - -
Vivi3g02022 890 SMART RhoGAP_3 200 390 IPR000198 GO:0007165
Vivi3g02022 890 Coils Coil 655 675 - -
Vivi3g02022 890 ProSiteProfiles Rho GTPase-activating proteins domain profile. 194 393 IPR000198 GO:0007165
Vivi3g02022 890 SUPERFAMILY GTPase activation domain, GAP 201 395 IPR008936 -
Vivi3g02022 890 MobiDBLite consensus disorder prediction 714 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02022 Vivi-Chr3 33550436 33557783 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02022 - - gsj:114415231 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02022 3 33550436 33557783 Vivi3g02022 3 33550436 33557783 ECH