Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02016 ATGTCCTCCTCCTCCACCACAACACTCAACTCCACCACTTCCAGACCCTTCCTCTCCACCTCCGTACTCCGACGTCGTTTACCCTTCGTAGGCGCGTTTTGCATGCTCACTTTGGGATTCACCAATTTCTATACACCATTGTCCTCTTCTGCCCTCAAAACGGGGTTCGTTCAATCTCTTTTACGATCCAAATTGGGTAGCAGGTTTTCAACAAAGAGTAGCAGTTTTATCCGAATGGAAGGGAATACTAGTAACACCACTGTTCCAAGCATAGTTGTGTATGTCACTGTTCCAAACAAAGAAGCGGGTAAGAAATTGTCCGAGAGCATTGTCCAAGAGAAACTTGCAGCTTGTGTCAATAGGGTACCGGGTATAGAATCAGTGTATCTGTGGGAGGGAAAGATCCAAACTGATTCTGAGGAACTTCTTATAATCAAGACCAGGCAATCTCTCTTGGAAGCACTGACAGAGCATGTCAAAGCAAATCATGAATACGACGTACCAGAGGTGATCTCCTTACCCATCACTGGGGGCAATCTCAAATATTTAGAATGGTTAAAAGAGAGCACAAAGGAGTGA 579 0.4508 MSSSSTTTLNSTTSRPFLSTSVLRRRLPFVGAFCMLTLGFTNFYTPLSSSALKTGFVQSLLRSKLGSRFSTKSSSFIRMEGNTSNTTVPSIVVYVTVPNKEAGKKLSESIVQEKLAACVNRVPGIESVYLWEGKIQTDSEELLIIKTRQSLLEALTEHVKANHEYDVPEVISLPITGGNLKYLEWLKESTKE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02016 192 Gene3D - 81 192 IPR015867 -
Vivi3g02016 192 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 57 192 IPR004323 GO:0010038
Vivi3g02016 192 FunFam Protein CutA 1, chloroplastic 79 192 - -
Vivi3g02016 192 SUPERFAMILY GlnB-like 90 191 IPR011322 -
Vivi3g02016 192 Pfam CutA1 divalent ion tolerance protein 91 188 IPR004323 GO:0010038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02016 Vivi-Chr3 33511318 33513624 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02016 K03926 - gmx:100792337 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02016 3 33511318 33513624 Vivi3g02016 3 33511318 33513624 ECH