Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01976 ATGAATCTCCTCGCCGACTCAACCACCAACCAAACGGAGGTTTCTTTGGCCATAGCCAAACATTTGTTCTCCAAAGAAGAATACAAAGAAAAGAACATTGTTTTTTCGCCATTGTCGCTCCAAATCATACTCAGTATCATAGCTGTTGGCTCTGATGGTTCCACGCAACACCAGCTTCTTGAATTCCTCCGTGCTAATTCCACCGACCAACTCAAAACCTTATGCTCTCAACTCGTTTCCTATGTGCTCGCTGATAACAGTCCAGCTGGCGGACCTCTGGTGTCTTTCGTCAATGGTGTGTGGATTCAACGATCTTTATCTCTTCAACATTCCTTCAAAAAAAGTGTAGCTACTGATTTCAAAGCCGCTATTGACTCAGTTGATTTCGCAACCGAGCCACTTGAAGTGAGAAATAAAGTGAATTCATGGGCTGAAAAGGAGACAAAAGGTCTTATAAAGAATCTCCTTCCACCTGGTGCAGTTGATAGCTTAACCAAACTTATCTTCGCAAATGCACTATACTTCAAAGGAGCATGGTCGTCAGAGTTTGATAAATCAAAAACAAAAGACTGTGATTTTTACCTTCTCAGTGGCAGTTCAGTCCAAGTTCCCTTCATGAGAAGCAAGAATGAACAGTATATTAGAACTTTTGATGGTTTTAAAGTCCTTCGTCTTTTTTATAAGGGAGGTGAGTCATATAAGCATGAGGATAGGCGTAGTTTCTCTATTTACTTTTATCTTCCTGATGCAAAAGATGGATTGTTAGCTTTGATCGGAAAGGTAGCTTCTGATTCTGAGTTTTTGAAGCATACACGTCCTAGAGATTCAGTGCCAGTAGGTGACTTTAGAATTCCAAGATTCAATATTTCTTTTGGCCTTGAAACTTCTAGCATGTTGAAGGAGCTAGGAGTGGTTTTACCTTTCTATGAAGCAGGTGGAGGTTTGACAAAAATGGTAGAGGACTCTCCTATAGGTGAAGAAGAACTTTATGTTTCGGCAATATATCACAAATCTTATATTGAAGTAAATGAAAGAGGAACTGAAGCTGCTGCAGCGACCAGTACTGGACTTAGGGTTGGATGCGCTATGCTTAGCAAACCACCACCTCCCATAGACTTTGTAGCCGACCACCCTTTCATGTTTTTGATTAGAGAAGATTGCTCTGGAACGGTGCTTTTTATTGGACAAGTGCTCCATCCCAAAGCACTTAAAGTTGCAAAAGAAGTGAATTCATGGGCTGAAAAAGAGACAAAAGGTCTTATAAAGAATCTACTTCCACCTGATGCAGTTGATAGCTTAACCAACCTTATCTTTGCAAATGCACTATACTTTAGAGGAGCATGGTTGTATGAGTTTGATAAATCCAAAACAAAAGATTATGATTTTTACCTTGTGAATGGTAGCTCAGTCAAAGTTCCCTTCATGACGAGTAAGTACAACCAACTCATTAGTGCTTTTGATGGTTTTAAAGTCCTTCAACTTTCTTATAAGGGTAGGCGTAGTTTCTCTATGTACTTTTATCTTCCTGATGCAAAGGATGGATTGTTAGCTTTGATTGAAAAGGTAGCTTCTGATTCTGATTTTTTGAAGCGTACACGTCCTAGTGATTATTCAGTGCCAGTAGGCGACTTTAGAATTCCAAGATTCAATATTTCTTTTGGCCTTGAGACTTCTGATATGCTAAAGGAGTTAGGAGTGGTTTTACCTTTCTCTAAAACAGGTGGGGGTTTGACAAAAATGGTGGAGGACTCTCCTGTAAGTGAAGAACTTTATGTTTCAAGCATGTACCACAAGTCTTTTATTGAAGTAAATGAAGAAGGAACTGAAGCTGCCGCAGCGACAATTACTGTACTTAGGGGTGGAGGTGGCTGGAATTCACCGCCGCCTCCGATAGACTTTGTAGCCGACCACCCTTTCATGTTTTTGATTAGAGAAAATTGCTATGGAACAATACTCTTTATTGGACAAGTGCTCAATCCCAATGATTTAGAAAACCGTCCGCAAAAACGGCCGCAACAAGATGATACCGGAAGGCGCCGAAATCGAAAGAAATTATGA 2058 0.4033 MNLLADSTTNQTEVSLAIAKHLFSKEEYKEKNIVFSPLSLQIILSIIAVGSDGSTQHQLLEFLRANSTDQLKTLCSQLVSYVLADNSPAGGPLVSFVNGVWIQRSLSLQHSFKKSVATDFKAAIDSVDFATEPLEVRNKVNSWAEKETKGLIKNLLPPGAVDSLTKLIFANALYFKGAWSSEFDKSKTKDCDFYLLSGSSVQVPFMRSKNEQYIRTFDGFKVLRLFYKGGESYKHEDRRSFSIYFYLPDAKDGLLALIGKVASDSEFLKHTRPRDSVPVGDFRIPRFNISFGLETSSMLKELGVVLPFYEAGGGLTKMVEDSPIGEEELYVSAIYHKSYIEVNERGTEAAAATSTGLRVGCAMLSKPPPPIDFVADHPFMFLIREDCSGTVLFIGQVLHPKALKVAKEVNSWAEKETKGLIKNLLPPDAVDSLTNLIFANALYFRGAWLYEFDKSKTKDYDFYLVNGSSVKVPFMTSKYNQLISAFDGFKVLQLSYKGRRSFSMYFYLPDAKDGLLALIEKVASDSDFLKRTRPSDYSVPVGDFRIPRFNISFGLETSDMLKELGVVLPFSKTGGGLTKMVEDSPVSEELYVSSMYHKSFIEVNEEGTEAAAATITVLRGGGGWNSPPPPIDFVADHPFMFLIRENCYGTILFIGQVLNPNDLENRPQKRPQQDDTGRRRNRKKL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01976 685 CDD serpinP_plants 10 400 - -
Vivi3g01976 685 SUPERFAMILY Serpins 9 400 IPR036186 -
Vivi3g01976 685 ProSitePatterns Serpins signature. 373 383 IPR023795 -
Vivi3g01976 685 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 13 400 IPR000215 GO:0004867|GO:0005615
Vivi3g01976 685 Gene3D - 179 393 IPR042185 -
Vivi3g01976 685 MobiDBLite consensus disorder prediction 662 685 - -
Vivi3g01976 685 Gene3D - 623 676 IPR042185 -
Vivi3g01976 685 CDD serpinP_plants 401 660 - -
Vivi3g01976 685 Pfam Serpin (serine protease inhibitor) 405 660 IPR023796 -
Vivi3g01976 685 Pfam Serpin (serine protease inhibitor) 11 400 IPR023796 -
Vivi3g01976 685 Gene3D Antithrombin, subunit I, domain 2 394 446 IPR042178 -
Vivi3g01976 685 Gene3D - 577 620 - -
Vivi3g01976 685 Gene3D Antithrombin, subunit I, domain 2 30 344 IPR042178 -
Vivi3g01976 685 SUPERFAMILY Serpins 404 660 IPR036186 -
Vivi3g01976 685 Gene3D - 448 563 IPR042185 -
Vivi3g01976 685 ProSitePatterns Serpins signature. 633 643 IPR023795 -
Vivi3g01976 685 SMART serpin2 401 660 IPR023796 -
Vivi3g01976 685 SMART serpin2 16 400 IPR023796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01976 Vivi-Chr3 32612298 32653582 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01976 K13963 - vvo:131657838 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01976 3 32612298 32653582 Vivi3g01976 3 32612298 32653582 ECH