Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01967 ATGCAGCAGAATCATGTGTCTAGAGTTTTCATGCAAGGATTTATCTTCCTTGTGATTGCTTTATTGGCTGCAGGATCAGGAAGCAAGGCCAAGACCAGAAGAAGCATCTTGGTTGGAGACTCCGAAGGTTGGCGCGCTGGCACGAATTACACTCAATGGGCCGTCAAAAATAGTCCATTCCACATAAATGACACATTAGTGTTCAAGTTTCCTCCACGGGGCAATTCGACCATTGTTCCGAGTGTTTACTTACTACCAAACATGTGGAGTTACATGACATGTGAATTTAGAGGAGCAAAGTTGCTAGGGAGTGCAGTTCAAGGAGTTGGAGAGGGCTTAAAGATTGAGCTGAATCAGTTGAAGCCTTACTACTTTGCTTCTGCTGAAGGGAATGCCTATGATTGTATTGCTGGACTCACCAAGTTCATTGCTGTTCCATCTACACGTTCCTTTTAA 456 0.4408 MQQNHVSRVFMQGFIFLVIALLAAGSGSKAKTRRSILVGDSEGWRAGTNYTQWAVKNSPFHINDTLVFKFPPRGNSTIVPSVYLLPNMWSYMTCEFRGAKLLGSAVQGVGEGLKIELNQLKPYYFASAEGNAYDCIAGLTKFIAVPSTRSF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01967 151 Gene3D - 32 147 IPR008972 -
Vivi3g01967 151 SUPERFAMILY Cupredoxins 36 145 IPR008972 -
Vivi3g01967 151 PANTHER GLYCINE-RICH PROTEIN-LIKE 29 150 - -
Vivi3g01967 151 ProSiteProfiles Phytocyanin domain profile. 34 148 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01967 Vivi-Chr3 32495242 32496282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01967 38 95 Miscellaneous Gene Families AT3G60270 37.931 6.72e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01967 - - gmx:100810439 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01967 3 32495242 32496282 Vivi3g01967 3 32495242 32496282 ECH