Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01965 ATGCCATCTGTTCATTCTAGTCCTTTCTACCCAATGGAAACTCCAGCAATAGCATCACTTCTCCGGCACACATCCGGCGAAAAGCGGAACAAATTCTCCGCCGGCGGCCTCTTAAAGATGTTCAAACTCTTCCCTATGTTAACATCAGGTTGCAAAATGGTAGCACTATTAGGAAGGCCAAGAAAGCCTATGCTAAAAGACAGTGCCACAACAGGCACAATCTTCGGTTACAGAAAAGGAAGAGTTATCATAGCAATACAAGAAGATACGCGTCAAATGCCGATTTTTCTCATCGAATTACCGATGCTAACGAGCGCGTTAAACAAAGAGATGTCATCCGATATAGTGAGAATCGCGCTGGAGAGCGAGACGAAGACGAATAAGAAGAAACTGCTTGAAGAGTTTGTTTGGGCTGTGTATTGTAATGGTAGGAAAGTTGGTTATTCTATAAGGAGGAAACAAATGGGTGATGAAGAACTTCAAGTTATGCAACATTTGAGAGGCGTGTCCATGGGAGCTGGCGTGTTGCCGACCGCATCGGATCATAAGGATAGTTCTGATGGTGAAATGACTTATATGAGAGCAAGGTTTGAAAGAGTTGTTGGTTCTAAGGATTCTGAAGCTTTTTATATGATTAATCCTGATAATAATATTAACAATAGTAATCAAGGACCTGAGTTTAGTATATTTTTTGTTAGAGCTAACTAG 708 0.4124 MPSVHSSPFYPMETPAIASLLRHTSGEKRNKFSAGGLLKMFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVIIAIQEDTRQMPIFLIELPMLTSALNKEMSSDIVRIALESETKTNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDEELQVMQHLRGVSMGAGVLPTASDHKDSSDGEMTYMRARFERVVGSKDSEAFYMINPDNNINNSNQGPEFSIFFVRAN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01965 235 Pfam Protein of unknown function, DUF617 71 233 IPR006460 GO:0010274
Vivi3g01965 235 PANTHER PROTEIN MIZU-KUSSEI 1 28 233 IPR006460 GO:0010274
Vivi3g01965 235 NCBIfam uncharacterized plant-specific domain TIGR01570 70 233 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01965 Vivi-Chr3 32434174 32435248 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01965 - - mtr:11420891 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01965 3 32434174 32435248 Vivi3g01965 3 32434174 32435248 ECH