Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01960 ATGGCAAAGTTTTCTGTCTCCCCTCTCTGCTCTCCCCCCTCTCCTCGTCTTCAACTTCACCGGCAACCATTCTTCACCGTTTCTCCACCAATCGCTCATCCCGCTTCCTCCGCAACCGATTCCAATTCCACTTTCACTTTCGCCACCACTTCCAATCTCACTCCCAAAGTCGTCGTCACCAGAGAACGCGGCAAAAACTCCAAGCTTATCAACGCTCTGGCCAAACATGAAATCAGTTGTTTGGAGCTTCCACTCATTGAGCACCTACGGGGACCGGATTTTGACAGGCTTCCTTGTGCATTAAGTGATAATGCATTTGATTGGGTTATCATAACTTCTCCGGAGGCTGGTTCAGTCTTTCTGGAGGCATGGAAAACTGCTGGGATGCCTCGCGCCAGAATAGGTGTTGTTGGATCAGGTACTGCAAGCATTTTCAAGGAGGCTTTGCAGTCTTCAAACAAATCACTTGATGTTGCCTTTTCACCATCAAAAGCAACCGGAAAAGTTTTGGCTATAGAGCTTCCCAAAATCGGAAATAAAACCACCATTCTATATCCTGCTTCAGCAAAGGCTAGCAATGAGATTGAGGAAGGGCTTTCAGATCGCGGATTTGAAGTTACTAGGATGAATACATATACAACGGTACCAGTTCAACATGTTGACCAGATGGTTCTAAAGCAAGCACTTGCTGCCCCTGTTGTTACAGTAGCTTCACCATCTGCAATTCGGGCATGGAAGAATCTCCTTTCAGATTCTGACTGGAGCAATTATGTTGCATGCATTGGTGAGACAACTGCTGCAATGTCAAGAAGATTAGGCTTCAAAAATGTGTACCACCCAACACAACCAGGCCTTGAAGGCTGGGTGGAGAGCATCCTTGAAGCATTAGGATCCTATGATGAATTATTGAGGTAG 915 0.4634 MAKFSVSPLCSPPSPRLQLHRQPFFTVSPPIAHPASSATDSNSTFTFATTSNLTPKVVVTRERGKNSKLINALAKHEISCLELPLIEHLRGPDFDRLPCALSDNAFDWVIITSPEAGSVFLEAWKTAGMPRARIGVVGSGTASIFKEALQSSNKSLDVAFSPSKATGKVLAIELPKIGNKTTILYPASAKASNEIEEGLSDRGFEVTRMNTYTTVPVQHVDQMVLKQALAAPVVTVASPSAIRAWKNLLSDSDWSNYVACIGETTAAMSRRLGFKNVYHPTQPGLEGWVESILEALGSYDELLR 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01960 304 Gene3D - 99 206 IPR036108 GO:0004852|GO:0033014
Vivi3g01960 304 SUPERFAMILY HemD-like 56 297 IPR036108 GO:0004852|GO:0033014
Vivi3g01960 304 FunFam Uroporphyrinogen-III synthase, chloroplastic 100 206 - -
Vivi3g01960 304 Pfam Uroporphyrinogen-III synthase HemD 68 290 IPR003754 GO:0004852|GO:0033014
Vivi3g01960 304 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 9 298 IPR039793 GO:0004852|GO:0006780
Vivi3g01960 304 Gene3D - 207 296 IPR036108 GO:0004852|GO:0033014
Vivi3g01960 304 CDD HemD 57 292 IPR003754 GO:0004852|GO:0033014
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01960 K01719 - gmx:100808086 437.573
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01960 3 32348305 32354310 Vivi3g01960 3 32348305 32354310 ECH