Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01947 ATGTGGGGATTTGGTGGTAGATATTATTGGGGGAGAAAGGTGGATTTTGAGAAAGCGAATGGGATAGTTGTGGTGTTCGCGTGGATGTCAAGTGAGGAGAAGCACTTTATGAGATATGTGGATCTTTATGCTTCTTTTGGATGGAATTCGATTATATGCCACTCTCAATTTCTCAATATGTTCTTCCCCGATAAAGCCACAAATCCTGCTGTTGATATTCTAAATGAACTCGTTGAGGTTCTGAAAATTAGGCCTTGTCCCATTGTCTTCGCATCTTTTTCGGGTGGTGCAAAAGCTTGTATGTTAAAGGTTCTTCAGATAATTACTGGGAAGTCTGAAACACATAATATGGATGATTACCAGCTTGTTAGAGACTCTATTTCTGGCTATATTTATGATTCCAGTCCAGTTGATTTTACCAGTGATATGGGCGTCCAGTTTATTCTACACCCATCTGTTTTAAAAGTGTCCCATCCACCAAAATTTGCTTCATGGATTGCCAATGGCATAGCATCTGGTCTTGATTCCCTTTTCCTCAACAGATTTGAATCCCACCGTGCAGAGTATTGGCGAACACTTTACTCCACCACTAGTATGCAGGTCCCGTATCTCATTTTTTGTTCAGAAAATGATGATCTCGCTCCTTTTGAAGTTGTTTCAAATTTTTTCCATCGATTAAAAGACCTTGGCGGCGATGTCAAGATGGTAAAGTGGAGTTCCTCTCCTCACGTAGGTCATTTCCATTATCATCCTGATGAATACAAAGCTGCTATCATCGAGATCCTTGGCAAGGCAGTCGCAACTTATAGTCACAAGAACAGAAGAATTGAAGATGAGAATCTGGGCATAGAGGGAATAAGAAATGAGATCACCGATCCGTTCTCTGAACTGAGGAAAGCAGCAACAACCTCAACTAGTTTCCAGGGTTTTGTTGTTGCTCCAAGTGAGAATTTGTCTCCTGGTTCACTGGAATATTATGACGGTAAAGATGTTGGGTCCGTATCAGATGAGCGAAAAGGAAATTTTATTCATCTCCCAAGCCGTCCAAGCATCAATGCTAACGGGGTTCTTGGCCAAATATTGTTTGACGTATGTGTCCCCAAGACAGTTGAGGATTGGGATGTCAGATCGAATTCGAAAAATGTGGGACTATTATCTGGTACTAGGAGACACATTCCTTTCAATCCTATAAAATGCATCCGACGGTCAAGGTTGTAA 1218 0.413 MWGFGGRYYWGRKVDFEKANGIVVVFAWMSSEEKHFMRYVDLYASFGWNSIICHSQFLNMFFPDKATNPAVDILNELVEVLKIRPCPIVFASFSGGAKACMLKVLQIITGKSETHNMDDYQLVRDSISGYIYDSSPVDFTSDMGVQFILHPSVLKVSHPPKFASWIANGIASGLDSLFLNRFESHRAEYWRTLYSTTSMQVPYLIFCSENDDLAPFEVVSNFFHRLKDLGGDVKMVKWSSSPHVGHFHYHPDEYKAAIIEILGKAVATYSHKNRRIEDENLGIEGIRNEITDPFSELRKAATTSTSFQGFVVAPSENLSPGSLEYYDGKDVGSVSDERKGNFIHLPSRPSINANGVLGQILFDVCVPKTVEDWDVRSNSKNVGLLSGTRRHIPFNPIKCIRRSRL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01947 405 SUPERFAMILY alpha/beta-Hydrolases 23 264 IPR029058 -
Vivi3g01947 405 Gene3D alpha/beta hydrolase 17 276 IPR029058 -
Vivi3g01947 405 PANTHER UNCHARACTERIZED 20 269 IPR008547 -
Vivi3g01947 405 Pfam Eukaryotic protein of unknown function (DUF829) 127 373 IPR008547 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01947 Vivi-Chr3 32207496 32212401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01947 - - gmx:100810227 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01947 3 32207496 32212401 Vivi3g01947 3 32207496 32212401 ECH