Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01944 ATGGAGGAGGGTGAAGGAATGAAGAAAATTCTAGTGACCGGTGCTTCCGGTTACCTTGGCGGGAAACTCTGTCACGCTCTCCACCGTCAAGGTTACTCCATTAAGGTCCTCGTCAGACGCTCCAGCGATCTTTCCGCACTTCCTCCTACCTCCGAAATCGTCTACGGCGACATCACTGACTTTTCCTCACTTCTAACCGCCTTACCAGATTGCTCCGTCGTCTTCCACCTCGCCGCAGTTGTCGAGCCTTGGCTTCCCGATCCCTCCAAATTCACCACCGTCAACGTTGAAGGTTTGAAGAATGTGTTGAAGGCAGTAAAGCAAACCAAGACGGTCGAGAAACTCATATATACGTCGTCGTTTTTCGCGATCGGACCAACTGATGGAGTTATTGCTGATGAGAATCAAGTTCATCATGAGAAATTTTTCTGCACAGAATATGAGAAATCAAAGGTTACAACCGATAAAATTGCACTTCAAGCTGTTTCAGAGGGTGTACCAATCACCATTCTTTATCCCGGGTTTATTTATGGACCTGGCAAAGTCACCGCAGGAAATGCTGTTGCAAATATGCTGGTAGAGCGTTTTAATGGTCGATTACCTGGTTACATTGGCAATGGAAATGATAAATTTTCGTTCAGTCATGTTGATGATGTGGTGGAGGGGCACATTGCTGCCATGAAAAAGGGAAAAATCGGGGAGAGATATCTATTGACGGGTGAAAATGCTTCGTTTAATCAAGTTTTTGATTTGGCTGCTGTGATCACTGGTACTAGAAAACCAATGTTTAGTATCCCTTTGTGGTTGATTGAAGCTTATGGGTGGTTGTCAGTATTGCTCTCTCGAATCACTGGAAAGTTACCTATCATCAGTCCACCGACGGTGTATTGTTTAAGACATCAGTGGGAATATTCATGCGAGAAAGCTAAAACGGAGCTAGACTATAAACCCAGAAGCCTGAGAGAAGGGCTTTCCGAGGTACTACTCTGGTTGAAGAACTTGGGATTAATAAGATATTAG 1020 0.4471 MEEGEGMKKILVTGASGYLGGKLCHALHRQGYSIKVLVRRSSDLSALPPTSEIVYGDITDFSSLLTALPDCSVVFHLAAVVEPWLPDPSKFTTVNVEGLKNVLKAVKQTKTVEKLIYTSSFFAIGPTDGVIADENQVHHEKFFCTEYEKSKVTTDKIALQAVSEGVPITILYPGFIYGPGKVTAGNAVANMLVERFNGRLPGYIGNGNDKFSFSHVDDVVEGHIAAMKKGKIGERYLLTGENASFNQVFDLAAVITGTRKPMFSIPLWLIEAYGWLSVLLSRITGKLPIISPPTVYCLRHQWEYSCEKAKTELDYKPRSLREGLSEVLLWLKNLGLIRY 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01944 339 PANTHER PROTEIN YEEZ 7 327 - -
Vivi3g01944 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 335 IPR036291 -
Vivi3g01944 339 FunFam NAD(P)-binding Rossmann-fold superfamily protein 7 338 - -
Vivi3g01944 339 Pfam NAD dependent epimerase/dehydratase family 10 236 IPR001509 -
Vivi3g01944 339 Gene3D - 1 338 - -
Vivi3g01944 339 CDD AR_FR_like_1_SDR_e 10 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01944 Vivi-Chr3 32167313 32169556 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01944 4 248 Miscellaneous Gene Families AT1G09510 29.588 2.68e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01944 K15891 - gmx:100792747 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01944 3 32167313 32169556 Vivi3g01944 3 32167313 32169556 ECH