Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01874 ATGGCCGCACCTCATTTTCTAAAACAGGCTCTGCTGCTTCGAGCTTGCTTCCATACCTACAAACACTTCACCGTCAGAGCAGTTACGGCGCGCCCCCGACTATGGTGCAGCGCCGCCATCACTCCACCGTCGGAAAAACCGAACGGTAATAGACTTAACTATGTCAACAACACGCTAAATCTCAGACGCGATGATTACTCGTCGAGTTCCGTTCGTTTGGATGATGAACCTGAGTACCGAAAATGGAAGGATAAAGAAGACGAGATTCTCAATGATATTGAGCCTATTCTATTGCTTACTAAGGAAATTCTTCACTCGCCAAGGTATATGGATGGAGGGAGACTAACTGTGGAGGATGAGAAAATGGTAGTAGAGAAGCTCCTTGCTTATCATCCACACTCTGAAGATAAGATGGGATGTGGTCTTGAATCCATTATGGTTGACCGTCATCCCCAATTTCGACACTCAAGGTGTCTTTTTGTTGTAAGAACTGATGGTGGGTGGATTGATTTCTCATATCAGAAGTGCCTTCGGGAATACGTTAGAGCGAATTACCCAGCTCATGCCGAAAGGTTTATTCGAGAACATCTTAAGCGCGGGAGTAGTTGA 609 0.4581 MAAPHFLKQALLLRACFHTYKHFTVRAVTARPRLWCSAAITPPSEKPNGNRLNYVNNTLNLRRDDYSSSSVRLDDEPEYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKMVVEKLLAYHPHSEDKMGCGLESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYVRANYPAHAERFIREHLKRGSS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01874 202 Gene3D - 90 183 - -
Vivi3g01874 202 PANTHER PROTEIN EMBRYO DEFECTIVE 514 68 200 IPR044673 -
Vivi3g01874 202 FunFam Protein DCL, chloroplastic 91 183 - -
Vivi3g01874 202 Pfam Protein of unknown function (DUF3223) 101 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01874 Vivi-Chr3 30330730 30337181 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01874 - - mtr:25489911 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01874 3 30330730 30337181 Vivi3g01874 3 30330730 30337181 ECH
Vivi3g01874 3 30330730 30337181 Vivi3g01874 3 30330730 30337181 PCT