Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01859 ATGAAGCGTTCACTTTCAATTTCATCAGCAACGAGCGAGGATAGAAAGATGAAAAAGCTGAAGGAGACAGAAATTGAGGAAGTTTCCGACAAGAATCGCGGGTTAGCGAGTTTCGATGAGAACATGTTGTTTGAGGTTCTGAAACACGTGGACGCGAAAACGTTAGCGATGGCTGGTTGTGTGAACAAACAGTGGCACAAAACAGCGCAAGACGAGAGACTTTGGGAGCTGATCTGTACGAAACAGTGGGCCAACACTGGTTGCGGTGAACAACAGTTGCGATCTGTGGTTCTTGCTCTTGGTGGGTTTCGTCGTCTTCATTCTCTTTATATTTTGCCTCTCTCAAAACCTCAAACATCATCGTCATCGTCATCAACATCATCGTGTTCCTCGTCTTGGGGTCCAATACCAAAGGTGGTTCGGCCGAAACCGTTACCTCGTTTAGGGAAAGACGAGGTTCATCTGTCTCTTTCTCTTCTCTCTATTCGTTATTATGAGAAGATGAAATTTCAATAA 516 0.4477 MKRSLSISSATSEDRKMKKLKETEIEEVSDKNRGLASFDENMLFEVLKHVDAKTLAMAGCVNKQWHKTAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHSLYILPLSKPQTSSSSSSTSSCSSSWGPIPKVVRPKPLPRLGKDEVHLSLSLLSIRYYEKMKFQ 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01859 171 PANTHER F-BOX PROTEIN SNE 18 169 IPR044184 GO:0009937|GO:0019005
Vivi3g01859 171 FunFam F-box protein GID2 25 134 - -
Vivi3g01859 171 CDD F-box_AtGID2-like 37 79 - -
Vivi3g01859 171 Gene3D - 18 134 - -
Vivi3g01859 171 SUPERFAMILY F-box domain 38 84 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01859 Vivi-Chr3 30105958 30107016 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01859 K14495 - gmx:100527591 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01859 3 30105958 30107016 Vivi3g01859 3 30105958 30107016 ECH