Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01855 ATGTCCGACCCGGAAGTCTCAACCATAGCCACATCGGAGCAAGACTCCTCCGCCTCACCCCAACAAAACGGCGACCAAACCAAACTCTCCTCCGCCGGTTTCAGCATATGGCCACCTACTCAGCGCACTCGCGACGCCGTCATCACTCGCCTAATCGAAACCCTAACCACTCCCTCCGTCCTCTCCAAGCGCTACGGCACATTGCCTTCTGACGAGGCCGCCTCAGCCGCCCGTCAGATCGAGGACGAGGCTTACTCTGTCGCCAGTGACTCCGGCGCTCCGGACGGCAGCGACGGTATCGAGATCCTCCAGGTTTACTCCAAGGAAATCAGTAAAAGGATGCTTGAAACCGTTAAGGCTAGACCTACTATAGGTTCCAATGCCGCTGATAACGATGCTGCTGAAGTTGCTGAAGCTCCTCCGTCGGAGGATCGTCCTTCTTCACCAACCATAGAGGATGCTCCTGAAACCGGCAAGATCGAGACTGAGACTGAGACTGATACCTGA 507 0.5621 MSDPEVSTIATSEQDSSASPQQNGDQTKLSSAGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAASAARQIEDEAYSVASDSGAPDGSDGIEILQVYSKEISKRMLETVKARPTIGSNAADNDAAEVAEAPPSEDRPSSPTIEDAPETGKIETETETDT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01855 168 MobiDBLite consensus disorder prediction 1 37 - -
Vivi3g01855 168 Pfam WPP domain 34 125 IPR025265 -
Vivi3g01855 168 Gene3D WPP domain 33 130 IPR038214 -
Vivi3g01855 168 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 11 149 IPR044692 GO:0000278|GO:0048527
Vivi3g01855 168 MobiDBLite consensus disorder prediction 120 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01855 Vivi-Chr3 30056744 30057782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01855 - - gmx:100804911 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01855 3 30056744 30057782 Vivi3g01855 3 30056744 30057782 ECH
Vivi4g05567 4 191026479 191027310 Vivi3g01855 3 30056744 30057782 PCT