Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01837 ATGTATTCACAAATGAAGAAAAAAACACCAAACCACATCAACATTCCCAAAACTCCTTACAACACCAGTCATGATGATGATGATGATTCAACCGAACACTCTCCACATATTCAACTTTGTAACAACCTCAACCCATGTTGTTTTTTCTGCATAATGAAAGAACAAGATCCATCTCTCAGAAAATCAAAAATATCAACATACTTCAAAGAAATGCCTCAAATAGACAATCAAGAACATGTTCTAGTCCTCAGTGGACTATGGAACATAGCCATGACACAACCCAACGATCCAGAGTTTCCTTCTCTAGGTATATTCAACTGCATGGCGAAACTCATCACCAAAGGTACAAACAACAAACACTGGCTTCTTCAAAGTCAAAACATTTACATACCTTATTATGCTGCTCATATTATTGGTTCTTACACCATGCACAAAGAAGAGTTTGCACAGATGGCTATTCGATCTGGTGTTATACCACCATTGTTAGAGCTTCTGAAAGGTAGGATAAGTTGGGTTGAACAAAGAGTTGCTGTTAGAGCACTTGGTCATTTAGCTAGTTACAGAAGCACTTTTGAATTAGTCTCTGAGTATGAATCTGAGTTGGTGAAATCAACTATGAATTTAGCTTCATCTTGCTTAGAAAAAATCTATGTTGAATTCGTATCTGTTAAGAGAAGAGTTCAGTATCATAGAAACTTGCTTACAAGAGGCTTAGGTGATTTAGAAATGGAGAATCGAAAAGCCGAAGAATGGGCTAGTCAACTTCAATGTTGGTGTATTTATCTTCTGAATTGCTTTGCTTCCAAAGATTCTAACTCTCTGAATTTAATATGTAAAAAAGTTTTCTTAAATGATTTATGTGATATGTGGGGTGGATTGATGAATAACACTTCACCAGGTGGATTTGGACTCATTAGAATCCTTTGTTATAATAAGTTAGGAAGAAAAAAAATTTCTGAGTCACCAAAAGTTGTGAAAAGTTTATGTAACCTCTCAAGATCTTGTGATGATTGGCAGTATCTTGGTATAGATTGTCTTTTATTGCTTCTCAAGGACCAAAATACAAGGTACAAAGTTATTGATAATGTTGATGTTGTTTCATGTCTTGTTGATTTGATTGAACTTAGAAGACTTGGTGATAAATCAAACGTTGGTGACACCATCATCACCAAGGTGCTAGTGCAACTTCTTGAACATACTAATAATGATTGCTATAAATTCGCTACGAAACTTGTTTCCCTCGATTCGAAGATTGATAGGAGGAATAAGGAGAGACTAATGTCGGAGGTAGAATTGAAAGAAAAACTGGTTACGGCGAAGTTGATGAAGAAAGAAGGGAATAAAATGTTTAGTTTGGGAAAAGTTGAAGAAGCTTTATTGAAATATTTTGAAGCACTTGAAGTGTGTCCATTGAGGTATAGAAATGAAAGAATGGTGATTTATAGTAACAAAGCTCAGTGTAGTCTTTTGCTTAAAGATCCTGATTCAGCTATAAGTGATTCAACACAAGCTCTTTGTTTATGTAATCCAGCAAATACACATGGGAAGAGTCTTTGGAGAAGATCACAAGCTTATGATATGAAAGGAATGGCAAAAGAGAGTCTTTTGGATTGTGTAATGTTTATGAATGGTTTTGTTAAGTCAAATGAGAAGAACAGTGTTAAGGTTCCTTATCATGTTGCTAGGATGTTTTGTAAACAAATGGATGCTACATGGATGTTTAGGAATGCTTGTTCAAAGTCAAAGTCAAAGTCAAAGGTAATAGAGAAGATTGAAGGTGATTATGAGAGTGGCAATGAGAGCAACTATGAAGAATTAGATCAAACCTATGATCATAAGAAGAATTTCATGGCAGGTTTGTGTACCATTATGGAAAAACCTTTTCATGTGAAAGAAGGTAGAAGGAGAAAGATGGAAAGAGCAAGAAGGAGATTCAAGAAAGGTGTTGTTGTAGCTCGATTAATGTAA 1968 0.3521 MYSQMKKKTPNHINIPKTPYNTSHDDDDDSTEHSPHIQLCNNLNPCCFFCIMKEQDPSLRKSKISTYFKEMPQIDNQEHVLVLSGLWNIAMTQPNDPEFPSLGIFNCMAKLITKGTNNKHWLLQSQNIYIPYYAAHIIGSYTMHKEEFAQMAIRSGVIPPLLELLKGRISWVEQRVAVRALGHLASYRSTFELVSEYESELVKSTMNLASSCLEKIYVEFVSVKRRVQYHRNLLTRGLGDLEMENRKAEEWASQLQCWCIYLLNCFASKDSNSLNLICKKVFLNDLCDMWGGLMNNTSPGGFGLIRILCYNKLGRKKISESPKVVKSLCNLSRSCDDWQYLGIDCLLLLLKDQNTRYKVIDNVDVVSCLVDLIELRRLGDKSNVGDTIITKVLVQLLEHTNNDCYKFATKLVSLDSKIDRRNKERLMSEVELKEKLVTAKLMKKEGNKMFSLGKVEEALLKYFEALEVCPLRYRNERMVIYSNKAQCSLLLKDPDSAISDSTQALCLCNPANTHGKSLWRRSQAYDMKGMAKESLLDCVMFMNGFVKSNEKNSVKVPYHVARMFCKQMDATWMFRNACSKSKSKSKVIEKIEGDYESGNESNYEELDQTYDHKKNFMAGLCTIMEKPFHVKEGRRRKMERARRRFKKGVVVARLM 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01837 655 SMART arm_5 145 186 IPR000225 GO:0005515
Vivi3g01837 655 MobiDBLite consensus disorder prediction 1 20 - -
Vivi3g01837 655 Gene3D - 106 414 IPR011989 -
Vivi3g01837 655 Gene3D Tetratricopeptide repeat domain 427 544 IPR011990 GO:0005515
Vivi3g01837 655 SUPERFAMILY TPR-like 433 538 IPR011990 GO:0005515
Vivi3g01837 655 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 42 641 - -
Vivi3g01837 655 MobiDBLite consensus disorder prediction 1 34 - -
Vivi3g01837 655 SUPERFAMILY ARM repeat 122 408 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01837 Vivi-Chr3 29686358 29688935 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01837 - - gmx:100777591 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01837 3 29686358 29688935 Vivi3g01837 3 29686358 29688935 ECH