Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01811 ATGAAGGAAGAAGAACTATGCAAGGCGGCGATTAAGGGTGAAACGGAGAAGGTAACGGCTCTTATTGACTCCGGCGCCGACGTTACCTATTTTGACGGCGATGGTCTCACTCCTCTTATGCACGCTGCAAAGCACGGCCATGCACCCATCCTCAACCTCCTTCTCTCCGCCGGCGCTCCTTGGAACGCTCTTTCTCCTTCCAACTTATCCGCCGGCGATTTCGCAATGCAAGAAGGTCACCAAGAAGCCTACGAGCTTCTCCTCAACGCCGGGATTCGATCTGAATTAGTGTTGGGAACAATTGCTAGGAAGGAAAAGAAAAACACTGATTCTGGATATGATTATTTGGAAGATAGGGTGAGTTTTAGTGAAGATAAAGTTATGGATTCTGAAAGTAAAGCTGTGATGATGGCATGGGAGAAACCGTTGATGGAGGCTCATGCTAAAGCTGTTTGTTTAGGAGGTGGTCATGTGCTCAATATTGGATTTGGAATGGGGCTTGTTGATACTGCTATACAGCAATATTCACCTGTGAAACACACCATTGTTGAGGCTCATCCGGAGGTGTATGAACGCATGCTTCGCGATGGTTGGGGTGAGAAGGAAAATGTTAGGATTGTTTTTGGGCGCTGGCAAGATGTTTTGTCTCAGCTTGAAACATATGATGGGATATTCTTTGACACCTATGGGGAGTACTACGATGATTTGAGAGAGTTCCACCAACAGCTCCCAGTATTGTTGAAACCGGATGGAGTTTACTCTTTCTTCAATGGTCTATGTGGTGGTAATGCATTTTTCCATGTTGTTTACTGCCACTTGGTATCTCTTGAGCTTGAGAATTTGGGGTATTCCACACAATTAATTCCTTTGCCTGTTAAGGATTGTTTGGGGGAACAAGTTTGGGAAGGTGTTAAACACAGATACTGGCAGCTTGATACATACTATCTCCCTGTTTGTCAGTCTGCTGATGACTCTGAGTGA 981 0.4536 MKEEELCKAAIKGETEKVTALIDSGADVTYFDGDGLTPLMHAAKHGHAPILNLLLSAGAPWNALSPSNLSAGDFAMQEGHQEAYELLLNAGIRSELVLGTIARKEKKNTDSGYDYLEDRVSFSEDKVMDSESKAVMMAWEKPLMEAHAKAVCLGGGHVLNIGFGMGLVDTAIQQYSPVKHTIVEAHPEVYERMLRDGWGEKENVRIVFGRWQDVLSQLETYDGIFFDTYGEYYDDLREFHQQLPVLLKPDGVYSFFNGLCGGNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEQVWEGVKHRYWQLDTYYLPVCQSADDSE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01811 326 ProSiteProfiles Ankyrin repeat profile. 34 66 IPR002110 GO:0005515
Vivi3g01811 326 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 13 321 - -
Vivi3g01811 326 PIRSF Rmt2 102 323 IPR017408 GO:0016274
Vivi3g01811 326 PIRSF Rmt2 1 114 IPR017408 GO:0016274
Vivi3g01811 326 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 106 326 IPR026480 -
Vivi3g01811 326 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 319 IPR029063 -
Vivi3g01811 326 SMART ANK_2a 1 30 IPR002110 GO:0005515
Vivi3g01811 326 SMART ANK_2a 34 63 IPR002110 GO:0005515
Vivi3g01811 326 Pfam Ankyrin repeats (3 copies) 7 92 IPR002110 GO:0005515
Vivi3g01811 326 FunFam Arginine N-methyltransferase 2 102 321 - -
Vivi3g01811 326 SUPERFAMILY Ankyrin repeat 6 93 IPR036770 -
Vivi3g01811 326 FunFam Protein arginine N-methyltransferase 2 1 99 - -
Vivi3g01811 326 Gene3D Vaccinia Virus protein VP39 105 321 IPR029063 -
Vivi3g01811 326 Gene3D - 1 104 IPR036770 -
Vivi3g01811 326 CDD AdoMet_MTases 158 253 - -
Vivi3g01811 326 ProSiteProfiles Ankyrin repeat region circular profile. 34 59 - -
Vivi3g01811 326 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 20 31 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01811 Vivi-Chr3 29258596 29260502 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01811 K18477 - gmx:100527621 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01811 3 29258596 29260502 Vivi3g01811 3 29258596 29260502 ECH