Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01797 ATGTCGAATCGTTACGGTCAGGGTAGACAAGACAATTACAACAACAACAACAAGGGTTTCAACAAACCTCAAAAGAAATTTGTCCCTAAAAATCCCACTCCAACCCTTTCAACTTCCCTGAGAGAAAAACAACAAGCTGGCTCCGGTAGTAGTGGCAATTCATCGGGTAGGGTTCAACCGGGGGGTGTGATTGGCAATTTCGTGAATTATTTGCCACAAGATGAAGCTGTGGCCGCTGGTTTTGGGGCACAGGATGGTGGATTGGATGCCCTTGAATCTCAGAGAGTTGTTGATCTTCTTAATTCACAGTTGTCTCGTTTGCTCAAGCTGAAACCCAAGGATTTTTGGTCACAAGTGGCTAGTGATACCTCCCTACATGAGTTTCTCAACAGTTTTCTGCAATTTAGGAGCAGATGGTATGATTTCCCTCACCGCGGGACCAGAGGGATTGTTGCTGGTGTTATTTTTGGAGAGCATGATTTGAGCCGTCGTGTTTTCATGTTATTATATCGGATGTCTTCCAATAGAGATCCGGGTGCTCGACCTGCTGATATGCTAAGTTTGAAAGATCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGATTTGCCAAAGTTGTTTGATATATGTGCCATATACAATCATGAAAATGAAGAATTGACAAAATTGCTGGTCAGAAAAGCATTGCATGCTCAGCCTTGGATGCATGATAATTTGACCGCAGTAACATTTCATTTTATGAGCATTGCAAGCACAATGCACGAACGGTGCAGTTCATCATTGGAGGTCTTATTTGCTTCTGGAAGTCTTGATGACCATAATGCTGCTTTTCTTCAAACTGATCTTCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATGCTTTTGTTAGTGCCTACGAACCAGCAGCTTTATTCTTCTCTTCCCCTGTTGAGATGAGTTATGGGAATGAGGATCTGCTGGGCTTCCTTGCCAGATTACATGATTTGCTAATTCCATCCATGCAAAAGGGGTTCCATATCATTTTTGCTGACAAACAAGATGACACAGTCTCTAATATTGTGGTTAGTTTGAAGATGTTAAGAATGAGGTTGGCGAAGTTTGGGTGGCAATTATTGCACTTTTGCTATTTAAGTGATGATGTGTTCCTGGATAGCATTCCTCTTCCAGCTGCCACAAAGATGTTTCCTGCCAATGTGGAAGACCCAGTCATCAGAGCGGATATTCTGATTCAAACATTTAGAGACATCAATTCAGTATCATTAAGTTTCCAGGAAATCCATCGGAAGGAAACATTTCTTCAAGATGTCGAAAGGAATTTCAATATATCAAGCAAGATTGAGGGATTAAAGAATAATGGATGGATATTTTTTGACGATGAACAACAAAAATATATATCTGGGATTTTGAGTTCTCCGAAGGAGATTAATAAGGAACCATACTCTGCAAAGATTGCTGTGCCGAACCAAACAGTGCAGATGGATGAAGAGGCTGTGGTCCTAGAGTCAAAAATCAGTCAAATTAGGGACCTGTTCCCTGATTATGGTAAAGGGTTTTTAACTGCATGTCTCGAGGTCTACGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTTCATAATGATCTGATGTGCTTAGATACTTCATTAGAGACGGTCCCACAGTCACAAGCCAAGTCCACCACTGTTAGCAGGAAAGATAAAGGAAAAGGCATACTAATTGATTCTACGCCAGTGTCCTCGAATACAAAAGTTTATAGTGGGAAGAACCAGACACAAGGGCCGTTGATGCCATCATCTGCTCCAGTTGGAAAATTTGTGAGGAAATCTAGAGCCGACATGCCTGATCCAAGTATTTTGGACAATAACAATGAGAAAGATGCATCGAGAATTTTACAATATGAATATGATGATGAGTATGACGACTCTTTTGATGACTTGGGTCTAAGCGTAGCGGACTCTGGAGTAGAAGAAAGTGAAATACTTGGTGACGATGAAGTAAATGAAAAATCGGGTAGATCGAGGGCAATAGGGTCTGGAAACTCTGTCCAAAATGCTTCTAATATAAAATGGGGCTCCAGGAAAACGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGGCAGGTTCTGTAGCAGTTGCAAATTCTGATGAAGCTTCATTAGTTAATGATGCTCAAAAGGAAATGATACATGGTCTTGGACGTGGCGGTAACCTTCCTCTTGGTGCGGTACAGAAGTTGGCAGATTCCTACAAGGGAGGTGGTAACCAATTCCATGTTTCTGAAACAGAAGGAAGGGGGAATAGCAGTGGCAGGGGAAAGAGAGAAGGAGGAAAACAATTTGAACATAATCAACAGCAGGGAAAACAATCAGATGTTTCTGAAGTAGAAGGTAGAGATCAGGGTCCAAATAACAGGGGGAGAGGGAGAGGGAGAGGAAGGGGAGGAGGTAGAAACAACCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGATTGAGTGGTTTTTGA 2550 0.4173 MSNRYGQGRQDNYNNNNKGFNKPQKKFVPKNPTPTLSTSLREKQQAGSGSSGNSSGRVQPGGVIGNFVNYLPQDEAVAAGFGAQDGGLDALESQRVVDLLNSQLSRLLKLKPKDFWSQVASDTSLHEFLNSFLQFRSRWYDFPHRGTRGIVAGVIFGEHDLSRRVFMLLYRMSSNRDPGARPADMLSLKDHEVLLQEKKLLDLPKLFDICAIYNHENEELTKLLVRKALHAQPWMHDNLTAVTFHFMSIASTMHERCSSSLEVLFASGSLDDHNAAFLQTDLLEVMDFINDAIVSMDAFVSAYEPAALFFSSPVEMSYGNEDLLGFLARLHDLLIPSMQKGFHIIFADKQDDTVSNIVVSLKMLRMRLAKFGWQLLHFCYLSDDVFLDSIPLPAATKMFPANVEDPVIRADILIQTFRDINSVSLSFQEIHRKETFLQDVERNFNISSKIEGLKNNGWIFFDDEQQKYISGILSSPKEINKEPYSAKIAVPNQTVQMDEEAVVLESKISQIRDLFPDYGKGFLTACLEVYDQNPEEVIQRILEGTLHNDLMCLDTSLETVPQSQAKSTTVSRKDKGKGILIDSTPVSSNTKVYSGKNQTQGPLMPSSAPVGKFVRKSRADMPDPSILDNNNEKDASRILQYEYDDEYDDSFDDLGLSVADSGVEESEILGDDEVNEKSGRSRAIGSGNSVQNASNIKWGSRKTPQYYVKDGKNYSYKVAGSVAVANSDEASLVNDAQKEMIHGLGRGGNLPLGAVQKLADSYKGGGNQFHVSETEGRGNSSGRGKREGGKQFEHNQQQGKQSDVSEVEGRDQGPNNRGRGRGRGRGGGRNNHYRKDQAMKKHFSGLSGF 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01797 849 SUPERFAMILY UBA-like 502 560 IPR009060 GO:0005515
Vivi3g01797 849 MobiDBLite consensus disorder prediction 1 59 - -
Vivi3g01797 849 ProSiteProfiles CUE domain profile. 503 546 IPR003892 GO:0043130
Vivi3g01797 849 CDD CUE_ASCC2 505 544 IPR041800 -
Vivi3g01797 849 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 10 848 - -
Vivi3g01797 849 MobiDBLite consensus disorder prediction 588 605 - -
Vivi3g01797 849 SMART cue_7 503 545 IPR003892 GO:0043130
Vivi3g01797 849 Pfam CUE domain 505 545 IPR003892 GO:0043130
Vivi3g01797 849 Gene3D - 501 546 - -
Vivi3g01797 849 MobiDBLite consensus disorder prediction 779 793 - -
Vivi3g01797 849 MobiDBLite consensus disorder prediction 765 849 - -
Vivi3g01797 849 MobiDBLite consensus disorder prediction 588 608 - -
Vivi3g01797 849 MobiDBLite consensus disorder prediction 804 818 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01797 K18667 - gmx:100778129 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01797 3 29135621 29143285 Vivi3g01797 3 29135621 29143285 ECH