Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01780 ATGGCTCAAAATGAAGGTGGTGGTGACAACAAAAAACCACAGTCTAAAGATGCAAAACAAGAACAGCTACCAGTAGCACATCCAGTGAAAGAACAATTACCTGGTGTTCAATATTGCATAAATAGTCCTCCTCCTTGGCCTGAAGCGATTTTGTTGGGGTTCCAGCATTACATTCTGACTCTTGGCATGACTGTTTTGATTCCATCTATAGTTGTACCTCAAATGGGTGGAACCAATGTAGAGAAGGCTAAGATGATTCAGAATATGCTATTTGTTTCTGGACTAAGTACATTTCTTCAATCTTTGTTCGGAACACGATTGCCAACTGTGGTTGTTGGTTCGTATACTTATATGATACCTATTATGTCTGTTGTACAAGCCAGCAGATACAGTTCATATTCAGATCCTTATGAGAGGTTCACTATGACAGTTAGGGGAATACAAGGTGCCTTGATTATATGTTCATGTTTCCAAATGGTTATAGGGTTCTTGGGACTATGGAGAAATGCAGTCAGGTTCCTTAGCCCACTTTGTGTTGTTCCTTATGTAACTTTCACTGGACTTGGTCTCTATCATCTTGGTTTCCCTATGCTCGCATCATGTGTTGAAATTGGACTTCCAGCTCTTATTATTATGGTTTTCATCTCTCAGTATCTTCATCATTGTATAAGCCCGAAGAAGTTTAAATTTGACCGATTTGCAGTGTTGTTTTCCATTGCAATTGCATGGTTATTAGCACAGCTTCTGACTTCAAGCACTATGTATAACAAGAAGCCAGAAAGCACACAAAATAGTTGCCGCACTGATCGGGCTGGTCTTATTACCTCTGCTCCATGGGTGTATTTTCCTTACCCCTTCCAATGGGGAAGTCCTACCTTCAACTATGGGGATACATTCGCAATGTTAGCAGCATCTTTTGTTTCTCTTTTTGAGTCTACTGGTACATTTTATGCTGCGGCTAGATATGGAAGTGCAACGCCTGTGCCACCTTCTGTTATCAGCCGCGGAGCTGGCTGGCTGGGAGTAGCTTCTTTGCTCAATGGCATGTTTGGTTCTTTAACCGGAAGCGCAGCATCAGTGGAAAATGCTGGATTATTGGCATTGACAAGAGTGGGAAGCCGAAGAGTCATCCAAATATCAGCCGGTTTTATGATTTTCTTCTCTGTATTTGGAAAATTTGGAGCATTTTTTGCTTCTATACCTTTGCCAATCATAGCAGCATTATACTGTGTATTCTTCGGCTATGTGTCTTCTGCCGGTCTTGGTTTTCTCCAATTCTGCAACCTCAACAGTTTCAGAACCAAATTTGTGTTAGGCTTCTCATTCTTCCTCGGCGTCTCTATACCGCAATATTTCAAAGAATATTATCAAGTAAAACATGAACATGCAGGATGGTTCAATGATGTATTGATTCTCATATTCGCATCGCACACGATGGTGGCTGCCTTGGTTGCTTTTATTTTGGATCTCACACTCGCACGGGAAGACAATGCAGCCCACGACGACAGTGGTTTGAAATGGTGGGAGAAATTCAGTATCTATGGATCTGATGTTAGGAGCAATGAATTCTATGGTTTACCATGCAGACTCAATGAGCTTTTTCCGGCCCTTTAA 1614 0.4151 MAQNEGGGDNKKPQSKDAKQEQLPVAHPVKEQLPGVQYCINSPPPWPEAILLGFQHYILTLGMTVLIPSIVVPQMGGTNVEKAKMIQNMLFVSGLSTFLQSLFGTRLPTVVVGSYTYMIPIMSVVQASRYSSYSDPYERFTMTVRGIQGALIICSCFQMVIGFLGLWRNAVRFLSPLCVVPYVTFTGLGLYHLGFPMLASCVEIGLPALIIMVFISQYLHHCISPKKFKFDRFAVLFSIAIAWLLAQLLTSSTMYNKKPESTQNSCRTDRAGLITSAPWVYFPYPFQWGSPTFNYGDTFAMLAASFVSLFESTGTFYAAARYGSATPVPPSVISRGAGWLGVASLLNGMFGSLTGSAASVENAGLLALTRVGSRRVIQISAGFMIFFSVFGKFGAFFASIPLPIIAALYCVFFGYVSSAGLGFLQFCNLNSFRTKFVLGFSFFLGVSIPQYFKEYYQVKHEHAGWFNDVLILIFASHTMVAALVAFILDLTLAREDNAAHDDSGLKWWEKFSIYGSDVRSNEFYGLPCRLNELFPAL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01780 537 MobiDBLite consensus disorder prediction 1 26 - -
Vivi3g01780 537 NCBIfam purine/pyrimidine permease 50 448 - -
Vivi3g01780 537 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 17 535 - -
Vivi3g01780 537 Pfam Permease family 48 453 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01780 Vivi-Chr3 28798838 28801645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01780 19 536 Organic Solute Cotransporters AT1G65550 62.689 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01780 - - qsa:O6P43_002856 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01780 3 28798838 28801645 Vivi3g01780 3 28798838 28801645 ECH