Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01778 ATGGTACGTGGTGCAAATGAAAAATTGAATGCTAAAGAAAATAAGAAGATCCTTAATGATGAAGAGGGAAGAGCACATACAATGAAAGAGAAAGGAGTGAAATTATTAAAAAAATCAAAATATCAACTTGTAGATTATAAATCATTGCCAACTTATTTAAAGGACAATGAATTCATATTGGACTATTATCGATCAGAGTGGCCATTGAAGCAGATTTTCCTCAGCATTTTCTCAATTCACAATGAGACACTTAATGTTTGGACGCATTTGATTGGGTTCTTCCTTTTTCTCTTTCTCACCGTTTGCACGGCCATGAAAGCTCCAATGGTCATGGATTCCCTTCAACATTTGCCTGAAATCATAGGAAAAGCTGACTTGAACAAGATTCATGCAGAGTTATTAAAGTGTCTGCCTTCACTCCCGAGTATTCCTGATCTCGATAAAGTTAAAAACGAGTTAATGACAGCTCTTCGTTCTCTTGACTTTTCCACATTATCAGGCTGGAATATTATGGAGCATCTCACCAGTTGCTTGCATGACAAGTTTTCTATAGGTTTGAAAGATGAAAAAATGGACTTTCTATCTCCTTCAATAGTCCAACCAATTACACGGTGGCCGTTTTATGCCTTCTTAGCTGGAGCTATGTTCTGTTTATTAGCCAGCAGCACGTGTCATCTCCTAGCTTGTCACTCGCAACGCCTTTCCTACATTTTGCTCAGAATTGACTATGCTGGAATTGCTGTACTAATTGCAACTTCATTTTATCCTCCTGTATATTACTCATTCATGTGCAACCCTTTCTTTTGTTACCTCTACTTAGGCTTCATAACATTGATGGGAGTTGCTACTATTGTTTTCTCTCTTCTCCCGTTTTTCCAAAAATCCGAGTTCAGAAAGTACCGCGCTTCGCTGTTCTTTCTGATGGGATTTTCGGGCATTGCGCCTATAATGCATAAATTGATATTGTATAGGCATGAACCCGAGGCGCTTCAAACTACAGGCTATGAAGTACTAATGGGAGTTCTTTATGGTTTGGGAGCTGCAATTTATGTCGCGAGGATACCGGAGAGGTGGATGCCGGGAAAGTTTGATATTGCTGGTCATAGTCACCAACTTTTTCATGTCTTTGTTGTGGCGGGGGCTTACACGCATTATCTCGACGGGTTAATTTACCTTAGATGGAGAGATTTGAAAGGTTGTTAG 1203 0.3948 MVRGANEKLNAKENKKILNDEEGRAHTMKEKGVKLLKKSKYQLVDYKSLPTYLKDNEFILDYYRSEWPLKQIFLSIFSIHNETLNVWTHLIGFFLFLFLTVCTAMKAPMVMDSLQHLPEIIGKADLNKIHAELLKCLPSLPSIPDLDKVKNELMTALRSLDFSTLSGWNIMEHLTSCLHDKFSIGLKDEKMDFLSPSIVQPITRWPFYAFLAGAMFCLLASSTCHLLACHSQRLSYILLRIDYAGIAVLIATSFYPPVYYSFMCNPFFCYLYLGFITLMGVATIVFSLLPFFQKSEFRKYRASLFFLMGFSGIAPIMHKLILYRHEPEALQTTGYEVLMGVLYGLGAAIYVARIPERWMPGKFDIAGHSHQLFHVFVVAGAYTHYLDGLIYLRWRDLKGC 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01778 400 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 26 395 IPR004254 GO:0016020
Vivi3g01778 400 Pfam Haemolysin-III related 77 385 IPR004254 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01778 Vivi-Chr3 28796400 28798448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01778 K07297 - gmx:100800851 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01778 3 28796400 28798448 Vivi3g01778 3 28796400 28798448 ECH