Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01754 ATGGCACCTTTATTCAATTGGGGTGCGAAAGCGAAAGAGAGTCATAGAGGAACACCGGTGGTTGTGAAAATGGAGAATCCGAATTGGTCCATGGTTGAACTCGAAGGTCCTTCAGAGGAAGATATTCTCATGACAACAAACCCTTCTTCAAGAGACAAAGGAAGAGGGAAAAACGCGAAACAGCTTACTTGGGTTCTTCTTTTGAAAGCTCATAGAGCTGCGGGTTGTTTAACTTCAATAGCCCCTGCATTGTACGGTCTTGTCTCCGCCGTGAAACGCCGTGTGGCTTCCGGGAGGACGGACGCGGAAACCGACACGGAGGGTGGTGGTGGTGATGGTGGGTGGGAAAAGGAAAACCCTACCGTGAAAAGTAGGTTCTATACGTTTATAAAAGTGTTTCTATCTTTGTCGGTGTTTATGTTGTTTTTTGAGGTGGTTGCTTATTTTAAAGGTTGGCATTTTAGTGCTCCGCATCTTGAATTATGGGCACCGGCATTTGGGGTTAAGGATGTTTTTGATTGGTTTTATGCTAGATGGGTTTTGGTTCGTGTTGATTATCTTGCTCCACCTTTGCAGTTTCTCACAAATGCTTGTATTGTGCTTTTCCTTATTCAGAGTGTAGATAGGTTGGTTCTTTGTTTAGGTTGTTTTTGGATCCGGTTTAAGAAAATCAAACCTGTTCCAAAAGGTGGTGCTGCTGTTTTAGATCTTGAATCTGGAGAAAAGGGTTTCTTCCCTATGGTTCTTGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAACAATCTATTGCTGCAGTGTGTAATTTGGATTGGCCAAAATCGAATTTTCTGATTCAAGTTCTTGATGATTCGGATGACCCGATAACGCAATCGTTGATTAAGGAAGAGGTTCAAAAATGGCAACAAGAAGGTGCCAACATTTTGTACCGACACCGTGTGATTCGGGATGGATACAAGGCTGGTAATCTGAAATCTGCAATGAATTGTAGCTATGTGAAGGATTATGAATTTGTTACAATTTTTGATGCTGACTTTCAACCTACCCCAGATTTCCTTAAAAAAACTGTTCCTCATTTTAAGGATAATGACGAATTAGGACTTGTTCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATCTTTTAACAAGGTTGCAGAATATTAATTTGTCTTTCCATTTTGAAGTCGAACAACAAGTGAATGGTGTTTTCCTTAATTTCTTTGGGTTCAATGGAACTGCTGGAGTTTGGAGAATAAAAGCTTTGGAAGAAGCTGGTGGTTGGTTGGAGAGAACTACTGTGGAGGATATGGATATTGCCGTTCGAGCTCATCTCCATGGATGGAAATTCATTTTCCTTAATGATGTTGAGTGCCAATGTGAGTTACCTGAATCTTACGAAGCATACAGAAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAGTTGTTTCGCCTTTGTTTGCCGGACGTCATACGAGCCAAGATAAGCATATGGAAGAAGTTCAACATGATATTTCTCTTTTTCCTTCTTAGAAAACTGGTGTTACCATTCTATTCATTCACCCTGTTTTGCATAATTCTTCCAATGACAATGTTCGTACCAGAGGCTGAAATTCCTGCATGGGTTGTTTGTTACATCCCAGCAATCATGTCATTTCTCAACATTCTTCCAGCACCAAAAGCTTTTCCCTTCATCGTACCATACCTCCTATTCGAGAACACAATGTCAGTTACCAAATTCAATGCCATGATCTCAGGCCTATTCCAGCTCGGAAGCGCGTACGAGTGGGTCGTCACTAAGAAATCCGGCCGTTCATCGGAAGGCGATCTAGCTTCATTGATCGAGAAACCAAAGCATCAAAGAGGGTCATCAGCGCCTGATCTCGAGGAAATGAAAGAAGAAATTAGGAAACAAGAAGAAAACGTGACGAAGAAAAAGAAGAAAAAACATAATAAAATGTATATGAAGGAACTTGCTTTGGCTTGTTTACTCTTAACAGCTTCAGCAAGGAGTCTCCTTTCAGCTCAAGGAATTCACTTCTACTTCTTGTTATTCCAAGGAGTATCATTCCTTTTGGTGGGTCTAGATTTGATTGGTGAACAAGTAGACTGA 2121 0.4125 MAPLFNWGAKAKESHRGTPVVVKMENPNWSMVELEGPSEEDILMTTNPSSRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIAPALYGLVSAVKRRVASGRTDAETDTEGGGGDGGWEKENPTVKSRFYTFIKVFLSLSVFMLFFEVVAYFKGWHFSAPHLELWAPAFGVKDVFDWFYARWVLVRVDYLAPPLQFLTNACIVLFLIQSVDRLVLCLGCFWIRFKKIKPVPKGGAAVLDLESGEKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSNFLIQVLDDSDDPITQSLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVTIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIRAKISIWKKFNMIFLFFLLRKLVLPFYSFTLFCIILPMTMFVPEAEIPAWVVCYIPAIMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLASLIEKPKHQRGSSAPDLEEMKEEIRKQEENVTKKKKKKHNKMYMKELALACLLLTASARSLLSAQGIHFYFLLFQGVSFLLVGLDLIGEQVD 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01754 706 FunFam probable xyloglucan glycosyltransferase 5 239 464 - -
Vivi3g01754 706 MobiDBLite consensus disorder prediction 620 651 - -
Vivi3g01754 706 Pfam Glycosyl transferase family group 2 340 535 IPR001173 -
Vivi3g01754 706 SUPERFAMILY Nucleotide-diphospho-sugar transferases 248 524 IPR029044 -
Vivi3g01754 706 Coils Coil 628 651 - -
Vivi3g01754 706 MobiDBLite consensus disorder prediction 620 644 - -
Vivi3g01754 706 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 178 703 - -
Vivi3g01754 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 239 463 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01754 Vivi-Chr3 28412152 28416048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01754 1 706 Miscellaneous Gene Families AT4G07960 77.343 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01754 - - gmx:100805969 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01754 3 28412152 28416048 Vivi3g01754 3 28412152 28416048 ECH