Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01724 ATGATTCATAGAACTCTCAATTTTCCAAGTTTAAGAAAATTGCTTCTTCAACGTGGTTATTATCTCTCTTCTTCCAAGATAGGAGCTTACAATGGGTATACATCTCAGCCCTCACCTCTTCCAATTCCAAGTGATGAAGAAGAGTATGCTAATGTGGATTGGGACAGTCTTGGATTTGGATTGATGCCAACTGATTTCATGTATGTAACAAAATGTGATGCTGGCCAAAGTTTTGGAGATGGGCAGCTCAATCGGTATGGAAACATTGAACTTAGTCCATCAGCAGGGGTTCTAAATTATGGCCAGGGATTATTCGAAGGCACAAAAGCATACAGAACAGAAAATGGGAAGCTGCTGCTATTCCGTCCAGAAGAAAATGCAATTCGTATGAAGATGGGCGCAGAAAGAATGTGCATGATACCCCCTTCCATTGATCAATTTGTTGATGCTTTGAAACAAACTGTGCTAGCAAATAAGCGTTGGGTTCCTCCATCGGGCAAAGGATCATTGTACCTTAGGCCTCTGCTCTTAGGAAGTGGCCCTGTTCTTGGTTTGGCACCAGCACCTGAATACACATTCCTCATATATGCTTCCCCGGTTCGCAACTATTTCAAGGAAGGTTCAGCACCTCTCAACTTATATGTAGAAGAAGATTTTGACCGCGCCTCTCGTCGTGGAACTGGAAGTGTTAAAACCATTTCCAATTATGCTCCTGTTTTGATGGCACAAAATAGAGCCAAGAGCCGAGGATTTTCGGATGTGTTATACCTTGATTCAGACAGCAAGAAAAATCTGGAGGAAGTCTCTTCTTGTAACATTTTTATTGCCAAGGGAAAAAAGATTTCAACACCTGCTATCAGTGGAACTATTCTTCCAGGAATCACCAGAAAAAGTGTCATTGAAATTGCTAGTGATTTGGGTTATCAGGTGGAAGAGCGCGTTGTTGCTGTCGAAGAATTGGCTGAGGCCGATGAAGTTTTCTGTACAGGAACTGCAGTTGGTGTTGCTCCTGTAGGGAGTATCACATACAGGAATACAAGGATGGACTATAAAACAGGTTCTGGGTCCATTTGTGAAGAGTTGTGCAAAACCATTTTAGGAATACAAACTGGAAGTATTGAAGATAAGAAGGGATGGATCGTTGAATTTGATTAA 1155 0.4173 MIHRTLNFPSLRKLLLQRGYYLSSSKIGAYNGYTSQPSPLPIPSDEEEYANVDWDSLGFGLMPTDFMYVTKCDAGQSFGDGQLNRYGNIELSPSAGVLNYGQGLFEGTKAYRTENGKLLLFRPEENAIRMKMGAERMCMIPPSIDQFVDALKQTVLANKRWVPPSGKGSLYLRPLLLGSGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEEDFDRASRRGTGSVKTISNYAPVLMAQNRAKSRGFSDVLYLDSDSKKNLEEVSSCNIFIAKGKKISTPAISGTILPGITRKSVIEIASDLGYQVEERVVAVEELAEADEVFCTGTAVGVAPVGSITYRNTRMDYKTGSGSICEELCKTILGIQTGSIEDKKGWIVEFD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01724 384 Pfam Amino-transferase class IV 103 341 IPR001544 GO:0003824
Vivi3g01724 384 CDD BCAT_beta_family 90 371 IPR033939 GO:0004084|GO:0009081
Vivi3g01724 384 PIRSF BCAT1 37 384 IPR005786 GO:0004084|GO:0009081
Vivi3g01724 384 FunFam Branched-chain-amino-acid aminotransferase 36 210 - -
Vivi3g01724 384 FunFam Branched-chain-amino-acid aminotransferase 212 383 - -
Vivi3g01724 384 ProSitePatterns Aminotransferases class-IV signature. 267 296 IPR018300 GO:0003824
Vivi3g01724 384 Gene3D - 212 383 IPR043132 -
Vivi3g01724 384 Gene3D - 33 211 IPR043131 -
Vivi3g01724 384 PANTHER AMINO ACID AMINOTRANSFERASE 40 382 IPR005786 GO:0004084|GO:0009081
Vivi3g01724 384 NCBIfam branched-chain-amino-acid transaminase 80 382 IPR005786 GO:0004084|GO:0009081
Vivi3g01724 384 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 47 380 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01724 Vivi-Chr3 27908252 27911116 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01724 K00826 - gmx:100782644 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01724 3 27908252 27911116 Vivi3g01724 3 27908252 27911116 ECH