Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01706 ATGGACCGCTCTCAATTACCCACTCTCCTCCTCCTCATCACCACCATTCCCCTCATCTCCGCCGTCCATGACCTCGCCGGAGATTTCCTCCGATTACCCTCCCAAGCTTCCACATTCCTCCATGATGACAACAACGAAGGCACCCGATGGGCCATTTTAGTCGCTGGTTCCAATGGCTACTGGAATTACCGACATCAGTCTGATGTATGTCACGCGTATCAAGTGTTACGAAAAGGTGGTTTAAAAGAAGAGAACATTATTGTTTTTATGTATGATGACATTGCTTACGACGAAGAGAATCCACGTCCTGGAGTCATCATTAACAGTCCAAAAGGAGAGAATGTTTACGAGGGAGTCCCTAAGGATTATACGGGTGAAGATGTTACTGTGAACAACTTCTTTGCTGCTTTGCTTGGAAATAAGTCAGCTCTTAGTGGCGGAAGTGGGAAGGTTGTGGATAGTGGTCCTAATGATCGTATATTTGTTTACTATAGTGATCATGGAGGTCCTGGGGTGCTTGGGATGCCCACTAGTCCTTACCTGTACGCATCTGATTTAATTGAAGTCTTGAAGATAAAGCATGCTGCTGGAACTTATAAAAGCCTAGTATTTTATCTAGAGGCATGCGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGGTCTAAATATCTATGCAACTACTGCCGCAAACGCAGAAGAAAGCAGTTGGGGAACATATTGTCCTGGAGGGGATGATAGTCCTCCCCCAGAATATGAAACCTGCTTGGGTGACCTATATAGCGTTGCTTGGATGGAAGACAGTGACAAACACAATTTGCAAACAGAAACTTTGCACCAGCAATATGAATTGGTCAAAGAAAGGACTTCAAACGGGAATTCAAATTTTGGTTCCCATGTGATGCAATATGGTGACATTGAGCTTAGCAAAGATAGTCTATTCCTATATTTGGGATCAAATCCTTCGAATGAAAATTTTACTTTTGTGGGTAGAAACTCATTAGTGCCACCTTCCAAAGCGACCAACCAGCGCGATGCAGATCTAATCCATTTCTGGGATAAGTTCCTCAAAGCTCCTCAAGGTTCTCCTAGGAAAGTTGCGGCTCAGAAGCAAGTTCTGGAAGCAATGTCTCACAGATTGCATATAGATGACAGCATAAAACTTGTTGGTAAACTCTTATTTGGCATGAAAAAGGGTCCAGAGGTTCTCACCAGTGTTAGACCAGCTGGGCAGCCTCTTGTTGATGACTGGGACTGCCTGAAAACACTGGTTAGGACCTTTGAGACACATTGTGGATCTTTATCTCAGTATGGGATGAAACACATGAGGTCCTTTGCAAACTTCTGCAACGCAGGAATACACAGAGAGCAAATGGCCGAGGCCTCTGCACAAGCATGCACCAACATTCCAGTCAATCCCTGGAGCTCTCTGCACAGTGGTTTCAGTGCATAA 1455 0.4454 MDRSQLPTLLLLITTIPLISAVHDLAGDFLRLPSQASTFLHDDNNEGTRWAILVAGSNGYWNYRHQSDVCHAYQVLRKGGLKEENIIVFMYDDIAYDEENPRPGVIINSPKGENVYEGVPKDYTGEDVTVNNFFAALLGNKSALSGGSGKVVDSGPNDRIFVYYSDHGGPGVLGMPTSPYLYASDLIEVLKIKHAAGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTAANAEESSWGTYCPGGDDSPPPEYETCLGDLYSVAWMEDSDKHNLQTETLHQQYELVKERTSNGNSNFGSHVMQYGDIELSKDSLFLYLGSNPSNENFTFVGRNSLVPPSKATNQRDADLIHFWDKFLKAPQGSPRKVAAQKQVLEAMSHRLHIDDSIKLVGKLLFGMKKGPEVLTSVRPAGQPLVDDWDCLKTLVRTFETHCGSLSQYGMKHMRSFANFCNAGIHREQMAEASAQACTNIPVNPWSSLHSGFSA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01706 484 PIRSF AE 2 484 IPR043577 GO:0004197|GO:0051603
Vivi3g01706 484 PIRSF Legumain 2 484 IPR001096 GO:0006508|GO:0008233
Vivi3g01706 484 Gene3D - 344 472 IPR046427 -
Vivi3g01706 484 Gene3D - 47 343 - -
Vivi3g01706 484 FunFam Vacuolar-processing enzyme beta-isozyme 344 472 - -
Vivi3g01706 484 FunFam Vacuolar-processing enzyme beta-isozyme 47 343 - -
Vivi3g01706 484 CDD legumain_C 346 467 - -
Vivi3g01706 484 Pfam Peptidase C13 family 49 319 IPR001096 GO:0006508|GO:0008233
Vivi3g01706 484 PANTHER HEMOGLOBINASE FAMILY MEMBER 33 469 IPR001096 GO:0006508|GO:0008233
Vivi3g01706 484 PRINTS Hemoglobinase (C13) cysteine protease signature 122 137 IPR001096 GO:0006508|GO:0008233
Vivi3g01706 484 PRINTS Hemoglobinase (C13) cysteine protease signature 50 74 IPR001096 GO:0006508|GO:0008233
Vivi3g01706 484 PRINTS Hemoglobinase (C13) cysteine protease signature 75 104 IPR001096 GO:0006508|GO:0008233
Vivi3g01706 484 PRINTS Hemoglobinase (C13) cysteine protease signature 150 169 IPR001096 GO:0006508|GO:0008233
Vivi3g01706 484 PRINTS Hemoglobinase (C13) cysteine protease signature 199 215 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01706 Vivi-Chr3 27643966 27648687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01706 K01369 - gmx:100791675 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01706 3 27643966 27648687 Vivi3g01706 3 27643966 27648687 ECH