Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01681 ATGAATAAGTTGCTAAAACATGAAGGGTTTCTAGGATTATATAAAGGAAATGGAGCTAGTGTTATCCGGATTGTTCCATATGCAGCCTTACACTTTATGACATATGAGCGGTATAAAAGTTGGATCCTTAACAATTACCCCATTTTAGGAACGGGTCCTTCTATTGATCTTTTAGCTGGCTCAGCAGCAGGGGGAACTTCAGTTTTATGTACATACCCCTTAGATCTCGCCCGTACCAAACTTGCTTATCAGTTGGTGGACACAAAAGTATGTTTCAAAGATGGTATTAAAGGGGTTCACTCTCAATCTATCGGTCCTGTTCATAATGGGATTAAAGGTGTACTTACGAGTGCTTATAAGGAAGCTGGAGTTCGTGGACTTTATAGAGGTGTAGGTCCAACGCTCACTGGAATTCTTCCATATGCTGGTTTGAAGTTCTATACTTATGAGAAATTGAAGATGCATGTTCCTGAAGAACATCAGAAGTCCATTTTGATGCGCCTTTCTTGTGGAGCTCTTGCTGGATTGTTTGGGCAGACTTTAACGTACCCTTTGGACGTTGTTAAGCGACAAATGCAGGTTGGAAGCTTGCAAAGTGCAGCTAACGGAGATGCCAGATACAAGAATACATTAGATGGACTTAGGAAGATCGTTCGTAATCAAGGGTGGAGGCAGTTGTTTGCAGGCGTGAGCATTAACTACATAAGGATTGTTCCTTCGGCTGCTATCAGCTTCACCGCATATGACATGATGAAGACATGGCTTGATGTACCACCCCAACAAAGGTCTAAATCAGTTTCAGCAGGATAA 810 0.4198 MNKLLKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILNNYPILGTGPSIDLLAGSAAGGTSVLCTYPLDLARTKLAYQLVDTKVCFKDGIKGVHSQSIGPVHNGIKGVLTSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQSAANGDARYKNTLDGLRKIVRNQGWRQLFAGVSINYIRIVPSAAISFTAYDMMKTWLDVPPQQRSKSVSAG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01681 269 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 41 IPR018108 -
Vivi3g01681 269 SUPERFAMILY Mitochondrial carrier 3 250 IPR023395 -
Vivi3g01681 269 PANTHER SOLUTE CARRIER FAMILY 25 2 257 - -
Vivi3g01681 269 ProSiteProfiles Solute carrier (Solcar) repeat profile. 162 254 IPR018108 -
Vivi3g01681 269 PRINTS Mitochondrial carrier protein signature 16 36 IPR002067 GO:0055085
Vivi3g01681 269 PRINTS Mitochondrial carrier protein signature 171 193 IPR002067 GO:0055085
Vivi3g01681 269 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Vivi3g01681 269 PRINTS Mitochondrial carrier protein signature 66 84 IPR002067 GO:0055085
Vivi3g01681 269 Pfam Mitochondrial carrier protein 55 156 IPR018108 -
Vivi3g01681 269 Pfam Mitochondrial carrier protein 2 45 IPR018108 -
Vivi3g01681 269 Pfam Mitochondrial carrier protein 162 255 IPR018108 -
Vivi3g01681 269 ProSiteProfiles Solute carrier (Solcar) repeat profile. 51 155 IPR018108 -
Vivi3g01681 269 Gene3D Mitochondrial carrier domain 1 256 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01681 Vivi-Chr3 27323052 27328918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01681 33 264 Organic Solute Cotransporters AT1G14560 66.667 1.29e-113 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01681 - - gmx:100784421 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01681 3 27323052 27328918 Vivi3g01681 3 27323052 27328918 ECH