Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01679 ATGGAAGATTTTCATAGATCAAAATCTATTTCAAATGGCCACCAAATGAATATGCAGCTAGAAAACTACTATGGACCAACAAAACCTTATGATCTAAGAAGCTATAGCTCTTCCTATGTACATGCTTCTAAGGATTTGAAGTTGAAGAAAGGTAAAAGCTTCTCATCTGGCTCATCTTTTTCTAAGTCTTTGAGTTTTGTAAATGATCCTGAAATTCAGAGAAAGAAGAGAGTTGCTAGCTATAAGATGTATTCTGTTGAAGGGAAAGTTAAAGGATCTTTTAGAAAGAGTTTTAGATGGCTTAAGAATAAGTACTCAGAGGTTGTTTATGGTTGGTAG 339 0.3392 MEDFHRSKSISNGHQMNMQLENYYGPTKPYDLRSYSSSYVHASKDLKLKKGKSFSSGSSFSKSLSFVNDPEIQRKKRVASYKMYSVEGKVKGSFRKSFRWLKNKYSEVVYGW 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01679 112 Pfam Domain of unknown function (DUF3511) 68 111 IPR021899 -
Vivi3g01679 112 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 14 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01679 Vivi-Chr3 27303278 27305126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01679 - - cpap:110824289 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01679 3 27303278 27305126 Vivi3g01679 3 27303278 27305126 ECH
Vivi4g05356 4 186919294 186919847 Vivi3g01679 3 27303278 27305126 PCT