Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01600 ATGGAAAAGATGGAAGGGATGATGCAACTACCGTACAACACAACAGTGAAGCTGATGCTCGGTTCACTCGAACGCAACCTGCTTCCTGACGCCGTCATCAGAAGACTCACACGCTTGCTTTTGGCCACTCGCCTTCGATCTTCTTACAAACCTTCTTCTGAACTTCAGCTCTCTGATCTTCTCCAGTTTGTACATTCTTTACAAGAGATGCCTATTGCTGTTAGTACTGATAAGGCGAAATCTCAACATTATGAATTACCAACCTCTTTCTTTAAGCTTGTTCTTGGAAACAATCTCAAATACAGTTCTTGTTATTTCTCTTCTGCCTCGAAGACGCTGGAAGATGCTGAAGAAGAAATGTTGAAACTGTATTGCGAGAGATCTAATCTGAAAGATGGTCATACGGTTCTTGATGTTGGATGTGGTTGGGGTTCGCTGACTTTATACATTGCCAAGAATTACAGTAATTCTAGGGTTACAGGAATCTGCAATTCCACAACTCAAAAAGCTTTTATCGAGGAGAAATGCGTGGAGCTGCAGCTGCAAAATGTGGACATCGTTGTTGCGGACATTAGCACATTTGAAATGGAAGCTTCTTACGACAAAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTAAACAAGATATCCAAATGGATGAAAGAGGATGGCCTTTTATTTGTTCATCATTTCTGCCACAAAGCATTTGCATACCACTTTGAGGACAAAAATGAAGATGATTGGATTACGCGATACTTCTTTACTGGAGGGACTATGCCTGCAGCAAATCTGCTTCTTTATTTCCAAGATGATGTTACTGTCGTCAATCATTGGCTTGTAAATGGGAAACACTACGCGCAGACCAGTGAAGAGTGGCTTAAAAGAATGGATAAGAACATGGCTTCCATCAAGCCAATTATGGAATCAACATACGGCAAAGATTCGGCTACTAAATGGACTGTTTACTGGAGAACATTTTTCATAGCTGTAGCAGAACTTTTTGGATACAATAATGGTGAAGAATGGATGGTTGTACACTTTCTTTTCAAAAAGAAATAA 1077 0.3965 MEKMEGMMQLPYNTTVKLMLGSLERNLLPDAVIRRLTRLLLATRLRSSYKPSSELQLSDLLQFVHSLQEMPIAVSTDKAKSQHYELPTSFFKLVLGNNLKYSSCYFSSASKTLEDAEEEMLKLYCERSNLKDGHTVLDVGCGWGSLTLYIAKNYSNSRVTGICNSTTQKAFIEEKCVELQLQNVDIVVADISTFEMEASYDKIFSIEMFEHMKNYKDLLNKISKWMKEDGLLFVHHFCHKAFAYHFEDKNEDDWITRYFFTGGTMPAANLLLYFQDDVTVVNHWLVNGKHYAQTSEEWLKRMDKNMASIKPIMESTYGKDSATKWTVYWRTFFIAVAELFGYNNGEEWMVVHFLFKKK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01600 358 PIRSF CmaB 14 357 IPR003333 GO:0008610
Vivi3g01600 358 Pfam Mycolic acid cyclopropane synthetase 78 329 - -
Vivi3g01600 358 Coils Coil 113 133 - -
Vivi3g01600 358 FunFam Cation-transporting ATPase 72 352 - -
Vivi3g01600 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 81 351 IPR029063 -
Vivi3g01600 358 CDD AdoMet_MTases 135 237 - -
Vivi3g01600 358 PANTHER - 4 358 - -
Vivi3g01600 358 Gene3D Vaccinia Virus protein VP39 73 352 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01600 Vivi-Chr3 26172433 26174822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01600 81 329 Acyl Lipid Metabolism Gene Families AT3G23530 26.772 2.06e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01600 - - gmx:100818389 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01600 3 26172433 26174822 Vivi3g01600 3 26172433 26174822 ECH