Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01583 ATGAAAGCATTCACAACACCATCATCACTATTAGCATTGAAATCTATCAACTTCACCCACACTCGAACTCGAATCTCCAATCCCTTTCTCTCCAACACTCTCCCCTTTCTCCCTCCCAATCTCAACCGCAAAATCCACTCTTCCTCTCCAATCATGGCTTCTTCTATACCACCATCCATCAATTCCGAACTAGCACGTTCCCCACCCGCAATTCCCATGCCCACTCCCCCTCTCACCAAATTCAACATTGGTCTCTGTCAACTCTCAGTAACCTCCGATAAAAACCGAAACATCGCTCACGCAAGGACTGCTATCCAAGACGCTGCTGCAAAGGGGGCGAAACTTGTTCTCTTACCTGAGATTTGGAATAGTCCTTATGCGAATGAGAGTTTTCCTGTTTATGCTGAGGATATTGATGCGGGTGGTGATGCTTCTCCTTCTACTGCTATGTTGTCTGAACTTGCGCGGTTGCTGAAAATTACTATTGTTGGTGGTTCTATTCCTGAACGTTCGGGAGATCGCGTGTATAATACTTGCTGCGTTTTTGGGACTGATGGGAAACTCTTGGCCAAGCACCGGAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACCTTTATTGAATCATTGACTCTCACTGCCGGGGAGACTCCAACAATCGTTGATACAGAGGTTGGACGCATTGGCATAGGCATTTGTTATGACATTAGGTTTCCAGAACTAGCAATGATATATGCAGCAAGAGGTGCACACTTGCTCTGCTATCCTGGGGCTTTTAACATGACAACTGGACCATTGCATTGGGAGTTATTGCAGAGATCAAGGGCTACAGATAATCAGCTATATGTGGCAACCTGTTCACCTGCTCGGGATAATGGACCTGGTTACGTGGCTTGGGGTCACTCCACTCTTGTTGGTCCATTTGGAGAAGTTCTGGCTACTACAGAGCACGAGGAGGCAATCATTATAGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAACCTCCCTGTGACTAAGCAACGCAGGGGTGATCTTTACCAGTTGGTAGATTTGCAGAGGCTGAATTTCCACTGA 1089 0.4582 MKAFTTPSSLLALKSINFTHTRTRISNPFLSNTLPFLPPNLNRKIHSSSPIMASSIPPSINSELARSPPAIPMPTPPLTKFNIGLCQLSVTSDKNRNIAHARTAIQDAAAKGAKLVLLPEIWNSPYANESFPVYAEDIDAGGDASPSTAMLSELARLLKITIVGGSIPERSGDRVYNTCCVFGTDGKLLAKHRKIHLFDIDIPGKITFIESLTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRSRATDNQLYVATCSPARDNGPGYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDLQRLNFH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01583 362 Gene3D - 79 356 IPR036526 -
Vivi3g01583 362 SUPERFAMILY Carbon-nitrogen hydrolase 80 354 IPR036526 -
Vivi3g01583 362 PANTHER NITRILASE-RELATED 63 354 - -
Vivi3g01583 362 FunFam Omega-amidase chloroplastic 78 356 - -
Vivi3g01583 362 ProSitePatterns Uncharacterized protein family UPF0012 signature. 231 251 IPR001110 -
Vivi3g01583 362 CDD nit 83 347 IPR045254 GO:0016811
Vivi3g01583 362 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 81 330 IPR003010 GO:0006807
Vivi3g01583 362 Pfam Carbon-nitrogen hydrolase 83 333 IPR003010 GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01583 Vivi-Chr3 25986837 25991663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01583 K13566 - qsa:O6P43_019133 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01583 3 25986837 25991663 Vivi3g01583 3 25986837 25991663 ECH