Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01580 ATGTATAAGTTCGAGAACACGCGTAGAGAAAAACGGTTTCAGTTTCACAGCCAAGCTGAAATTGAAACCCCCTCTTTCTCTTCCATTGTTCTTGACAAGATTTACCGTTCCATCGACGAAGAAGAGAGAAAAAGTTCCGATAAGAAATTCTTCACAGAAACTACAGTCAACAGAATGAGCAAAATCAATGCTAAATGCAATAGATTCCACCAAGAAGAACAAAATCAGAGAAAATTGCATCATGATTGCGATCGTGGTCAAGATGTTATGTTCTTCAGTACCACTTCAAGCTCTTCAGATTCAAGTTCTGGATTATTATCTTCTTCCTCCGATACAGAATCAATGTACCAAGAGAAATCACAAAATTCATGTTTCGCTCATTCCAAGCCTAAGCCGGTGAAAACAGGGGTTCCTCCAAAGAGAAGCATTGCCAAAGACGAAGATACATTCATTAAATCAAAATCAAGAGCGATGAAGCTTTACAACAATCTCAAAAAGGTGAAGCAACCAATCTCACCAGGTGGAAAACTCACAAGTTTTCTCAACTCTCTCTTCATAAACACGAAGAAAACAAAAACTGATATGAATGCAGAGAGAACATGTAAACCAGGACAAACTTCAACTTGTTCTTCAGCTTCTTCGTTTTCGCGTTCTTGTTTAAGTAAAAACACATCTACATCAAGAGACAAATCACGTAATGGCGTTAAAAGAACGGTGCGTTTTTGTCCAGTAAGTGTGATTGTTGATGAAGATAATCGACCTTGCGGTAATAAATTTTTGCATGGAGAAGAAGATTCAGGTCTAACAGCATTGTCTGTTCCAACGGCATGGAAAATTGGACGAACAGCGAGTAAGAAGAAAGAAGAAGAGGTTTTGAATATGAACAAGAGAGTGGGTGATGTTCTAAGAGAGTTTCATCTTAATCGAAAGCTTATGAGAGATTTTTCTACGAGAAAAAACGAGAAGGATGATGATGACGTGGCAAGTTGTTCAAGTTCAGATCTTTTCGAGCTTGATCACTTAGCTTTGATCGGAAATGATAAGTATTATTCAGAGGATTTGCCTGTGTTTGAAACTACTCATGTTCGTACTAACCGTGCCATTCACATAATGTAA 1116 0.3799 MYKFENTRREKRFQFHSQAEIETPSFSSIVLDKIYRSIDEEERKSSDKKFFTETTVNRMSKINAKCNRFHQEEQNQRKLHHDCDRGQDVMFFSTTSSSSDSSSGLLSSSSDTESMYQEKSQNSCFAHSKPKPVKTGVPPKRSIAKDEDTFIKSKSRAMKLYNNLKKVKQPISPGGKLTSFLNSLFINTKKTKTDMNAERTCKPGQTSTCSSASSFSRSCLSKNTSTSRDKSRNGVKRTVRFCPVSVIVDEDNRPCGNKFLHGEEDSGLTALSVPTAWKIGRTASKKKEEEVLNMNKRVGDVLREFHLNRKLMRDFSTRKNEKDDDDVASCSSSDLFELDHLALIGNDKYYSEDLPVFETTHVRTNRAIHIM 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01580 371 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 15 368 IPR039621 GO:0009734
Vivi3g01580 371 MobiDBLite consensus disorder prediction 94 128 - -
Vivi3g01580 371 MobiDBLite consensus disorder prediction 94 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01580 Vivi-Chr3 25917069 25918371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01580 - - vvo:131655215 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01580 3 25917069 25918371 Vivi3g01580 3 25917069 25918371 ECH
Vivi3g01580 3 25917069 25918371 Vivi7g03973 7 105736208 105737776 ECH
Vivi3g01580 3 25917069 25918371 Vivi4g05325 4 186338400 186339807 ECH
Vivi1g00765 1 16387796 16389444 Vivi3g01580 3 25917069 25918371 ECH
Vivi7g03973 7 105736208 105737776 Vivi3g01580 3 25917069 25918371 ECH