Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01556 ATGATTCCATCGTTTGTGAGCTTCTCCGGCCTATACAGCGGCTACCTCCGTCGCTGCTTCACCGGATCAGGTCTCTTCTCTCAAAAAATCAACATCGACAACGAAACAACTCTCCACGTTTGGGGACCAACAAATCAATCCACACATAAACCCTCACTCGTTCTGATTCACGGATTCGGTCCTACAGCCATATGGCAGTGGCGTAAACAAGTTCAATTTCTCGCTCCTCATTTCAATGTCTACGTTCCCGATCTAATCTTCTTCGGCGAATCAACAACGAGATCGAAGGAAAGGAGCGAGAAATTCCAAGCGGAGTCGGTTGGGAAATTGTTGGAGAAATTAGGGTTGAAGAAGTGCCACGTGGCGGGGACGAGTTATGGCGGTATTGTTGCTTATAATTTGGCGAAAATGTTGGGGGAAGAGAGAATAGAGAAAGTGGTTATTTGTAGCTCTGGTGTTAATATGACGAAGAATCATAACGTCAAGTTGTTGGAAAGAGCTGGAGTGGAGAAAATTGAGGACCTTATGTTGCCTACTTCTCCGCAAAATTTGAGGAAATTGATGACACTTGCCGTGGCTAAAAGCATCTCTTTCATGCCTGATTTTCTCTTGAAAGACTTCTTAAAGAAATTATACACAGAAAATAGGAAGGAAAAAATGGAGCTTCTAGGTGGCTTGTCCCTCGGAAAGATTGATACGTCAAACATTTCACCTCTTCAACAGGAAGTTCTCATAATCTGGGGTGAAGATGACAAAATATTTCCTGTGCAGATGGCCCATGAACTGAAAGAGGTAATCAGTAAAAAGGCAAGAATAGAGTTGATAAAGGAGGCATCTCATGTGCCTCAAGCTGAAAACCCAGAGGAATTCAACAATATTATCTTTAATTTCTTACGTTCCAGCTCTTAA 909 0.4268 MIPSFVSFSGLYSGYLRRCFTGSGLFSQKINIDNETTLHVWGPTNQSTHKPSLVLIHGFGPTAIWQWRKQVQFLAPHFNVYVPDLIFFGESTTRSKERSEKFQAESVGKLLEKLGLKKCHVAGTSYGGIVAYNLAKMLGEERIEKVVICSSGVNMTKNHNVKLLERAGVEKIEDLMLPTSPQNLRKLMTLAVAKSISFMPDFLLKDFLKKLYTENRKEKMELLGGLSLGKIDTSNISPLQQEVLIIWGEDDKIFPVQMAHELKEVISKKARIELIKEASHVPQAENPEEFNNIIFNFLRSSS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01556 302 SUPERFAMILY alpha/beta-Hydrolases 29 299 IPR029058 -
Vivi3g01556 302 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Vivi3g01556 302 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Vivi3g01556 302 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Vivi3g01556 302 Gene3D alpha/beta hydrolase 21 301 IPR029058 -
Vivi3g01556 302 Pfam alpha/beta hydrolase fold 51 286 IPR000073 -
Vivi3g01556 302 PANTHER SI:DKEY-122A22.2 11 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01556 Vivi-Chr3 25555394 25568510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01556 51 165 Acyl Lipid Metabolism Gene Families AT4G02340 31.092 5.47e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01556 - - lja:Lj1g3v1788330.1 430.254