Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01555 ATGATTCCATCGTTTGTGAGCTTCTCCGGCCTATACAGCGGCTACCTCCGTCGCTGCTTCACCGGATCAGGTCTCTTCTCTCAAAAAATCAACATCGACAACGAAACAACTCTCCACGTTTGGGGACCAACAAATCAATCCACACATAAACCCTCACTCGTTCTGATTCACGGATTCGGTCCTACAGCCATATGGCAGTGGCGTAAACAAGTTCAATTTCTCGCTCCTCATTTCAATGTCTACGTTCCCGATCTAATCTTCTTCGGCGAATCAACAACGAGATCGAAGGAAAGGAGCGAGAAATTCCAAGCGGAGTCGGTTGGGAAATTGTTGGAGAAATTAGGGTTGAAGAAGTGCCACGTGGCGGGGACGAGTTATGGCGGTATTGTTGCTTATAATTTGGCGAAAATGTTGGGGGAAGAGAGAATAGAGAAAGTGGTTATTTGTAGCTCTGGTGTTAATATGACGAAGAATCATAACGTCAAGTTGTTGGAAAGAGCTGGAGTGGAGAAAATTGAGGACCTTATGTTGCCTACTTCTCCGCAAAATTTGAGGAAATTGATGACACTTGCCGTGGCTAAAAGCATCTCTTTCATGCCTGATTTTCTCTTGAAAGACTTCTTAAAGAAATTATACACAGAAAATAGGAAGGAAAAAATGGAGCTTCTAGGTGGCTTGTCCCTCGGAAAGATTGATACGTCAAACATTTCACCTCTTCAACAGCAGGAAGTTCTCATAATCTGGGGTGAAGATGACAAAATATTTCCTGTGCAGATGGCCCATGAACTGAAAGAGGTAATCAGTAAAAAGGCAAGAATAGAGTTGATAAAGGAGGCATCTCATGTGCCTCAAGCTGAAAACCCAGAGGAATTCAACAATATTATCTTTAATTTCTTACGTTCCAGCTCTTAA 912 0.4276 MIPSFVSFSGLYSGYLRRCFTGSGLFSQKINIDNETTLHVWGPTNQSTHKPSLVLIHGFGPTAIWQWRKQVQFLAPHFNVYVPDLIFFGESTTRSKERSEKFQAESVGKLLEKLGLKKCHVAGTSYGGIVAYNLAKMLGEERIEKVVICSSGVNMTKNHNVKLLERAGVEKIEDLMLPTSPQNLRKLMTLAVAKSISFMPDFLLKDFLKKLYTENRKEKMELLGGLSLGKIDTSNISPLQQQEVLIIWGEDDKIFPVQMAHELKEVISKKARIELIKEASHVPQAENPEEFNNIIFNFLRSSS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01555 303 Gene3D alpha/beta hydrolase 21 302 IPR029058 -
Vivi3g01555 303 PRINTS Alpha/beta hydrolase fold signature 244 258 IPR000073 -
Vivi3g01555 303 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Vivi3g01555 303 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Vivi3g01555 303 Pfam alpha/beta hydrolase fold 51 287 IPR000073 -
Vivi3g01555 303 PANTHER SI:DKEY-122A22.2 11 301 - -
Vivi3g01555 303 SUPERFAMILY alpha/beta-Hydrolases 29 300 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01555 Vivi-Chr3 25555391 25568510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01555 51 165 Acyl Lipid Metabolism Gene Families AT4G02340 31.092 5.56e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01555 - - lja:Lj1g3v1788330.1 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01555 3 25555391 25568510 Vivi3g01555 3 25555391 25568510 ECH