Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01480 ATGAAGACAATTATCTCGCGCTTGATCCATTCCTCTCCTTCCTCCATTTCCAAACTCAATGCATTTGCTGTGTCGATTAACGGGAGAAATTTGTCTACGGACTCTACGAAGATTGATGAGCCGTTTAAAGTTGATGAAGCTGGGACTGTAAATGTGCCACCACCTCAACCCCCAACAGAGAAGTTGCTTGTGTTGGGAGGCAATGGTTTTGTTGGATCTCATGTCTGTAGAGAAGCCTTAAATCGCGGTGTGCCTGTTGCGAGTATTAGTAGGTCTGGCAGGTCATCCGTTCACGACTCATGGGCTAGCAATGTCATATGGTATAAAGGGAATCTCCTTTCCCCCGAGTCATTGAAAGAGGCTCTGAATGGGGTCACTACTGTTATCTCATGTGTTGGTGGTTTTGGCTCCAACGCAACCATGTACAAAATTAATGGGACTGCTAACATCAATGCAATTAGAGCAGCTTCAGATGAAGGTATTAAAAGATTTGTCTATATCTCTGCTGCCGACTTTGGTGTTGTAAATTACTTGCTGCAGGGGTATTATGAAGGAAAGAGAGCGGCTGAAACAGAGCTTTTGACTAGATTTCCATATGGAGGAATAATTCTGAGGCCAGGGTTTATTTATGGGACTCGAAATGTTGGGAGTATGAAGATACCTCTTGGCATAGTTGGATCACCGATGGAGATGGTTTTTCAACATACCAGAGCATTGACCCAGATCCCACTTGTTGGGCCTCTATTGACACCTCCTGTCAATGTTACTGCGGTGGCTAAAGTTGCTGTTAGAGCTGCTATTGATCCTGTTTTTCCGCCTGGGGTCATAGATGTCTATGGAATCCAACGTTACAGTCAGAATAAATCAAAGTAG 873 0.4422 MKTIISRLIHSSPSSISKLNAFAVSINGRNLSTDSTKIDEPFKVDEAGTVNVPPPQPPTEKLLVLGGNGFVGSHVCREALNRGVPVASISRSGRSSVHDSWASNVIWYKGNLLSPESLKEALNGVTTVISCVGGFGSNATMYKINGTANINAIRAASDEGIKRFVYISAADFGVVNYLLQGYYEGKRAAETELLTRFPYGGIILRPGFIYGTRNVGSMKIPLGIVGSPMEMVFQHTRALTQIPLVGPLLTPPVNVTAVAKVAVRAAIDPVFPPGVIDVYGIQRYSQNKSK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01480 290 Pfam NAD(P)H-binding 66 209 IPR016040 -
Vivi3g01480 290 Gene3D - 56 279 - -
Vivi3g01480 290 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED 35 285 - -
Vivi3g01480 290 FunFam Uncharacterized protein, chloroplastic 55 282 - -
Vivi3g01480 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 61 280 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01480 Vivi-Chr3 24504533 24509410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01480 - - psat:127087815 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01480 3 24504533 24509410 Vivi3g01480 3 24504533 24509410 ECH