Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01473 ATGGCGTTGGTGAATTCCTTTCTTCTCCCCACAAAAAGCCATCTTGCTTTGCATGTTTCACCTCCACCATCCAAAAAAACACTCCTTTGTACTAGCCCATCTTCCAACTTCAGTTTCAACTTCAACAAAGCCTTGTCATCAAGAAGAAGGAAGCAATCAGGGTGTGTTGCCGCCGCATCAACTTTACTTGATGGGGAAGAAGATCAGAAGGTTCTAGTGGGACCTTCTAGCGAGCAAGAACGCAAGGGTGAGAGAGAGGTTGTAGATTATGATTGGACAGAGGAATGGTACCCTTTGTATCTCACTAAGAATGTACCACATGATGCACCATTGGGTCTCAAAGTGTATGATAAGAACGTTGTTTTGTTTAAAGATGGTAATGATAAGTTTCAATGCTATGAAGATCGATGTCCTCACAGGCTCGCAAAACTATCTGAAGGCCAGTTGATTGATGGAAGGCTTGAATGCCTATATCATGGATGGCAATTCGAAGGCGAGGGAAAATGTGTCAAGATACCTCAGCTTCCAGCTGATGCCAAAATTCCCAAATCAGCATGTGTTAAAACATATGAGGTGAGGGACTCTCAAGGTGTCCTTTGGGTATGGATGTCTCCAAAGACACCTCCAAATGTAAGTAAAATACCTTGGTTTGAGAACTTCGCGAGGCCAGGGTTTCAAGATATTTCAACAACTCATGAACTCCCATATGACCATTCTATTCTGCTGGAAAACTTGATGGATCCTGCTCATGTTCCAATCTCGCATGATAGAACAGATTGGACTGCAAAAAGAGAAGATGCACAGCCACTAAGTTTTGAGGTGACTGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGACGAGAGAAAGATGGTTCTAGGCCTAACTTCTTACGGTTCGAGGCTCCTTGTGTTCTACAAAATAACCGGGAAATCGTTGATAAAAATGGTGAAATAAACCACTTCAGTGGTTTGTTCCTTTGTAGACCAACAGGGCAAGGAAAATCTATGTTGATAGTGAGGTTTGGAGCAACAAAAAGATCTCCATTAATAAAACTATTTCCTGAATGGTACTTCCATCAGAATGCAAGCAAGGTTTTTGAACAAGACATGGGGTTCCTATCATCTCAAAATGAAATTCTTTTGAAAGAGAAGGTTCCAACAAAGGAGCTATACCTCAATTTAAAATCATCAGACACGTGGGTTGCCGAATACCGAAAGTGGATGGATAAAGTGGGACACGGAATGCCATATCATTTCGGCCACAGCACTATTTCCTTGCCTAAAGAGCCTGCTGTGGTTGAACATGCACCTGCCGGACTTGTGGCAGGACTATCAGCTTCCTCGCCTGCAAAGGGAGGCATCGGAACAATGCATGCTCCAAATTTAGCAAATAGATATTTCAGACATGTAATACATTGCAAGGGATGTAGTACTGCTGTCAAAGCTTTTCAAACTTGGAAAAATGTCCTCTCAGCTGTGGCTGTTGCATTTGCTGCATTGGCAATTCTGGTATCTGGGAGACAATGGAAAGTCCTTCTTTTGGCATCTGCATCCCTTTGCTCTGTAGGAGTATATGCCTGTTCAACAGCTATTGCAATGAATACAACAAACTTTATTAGGGTACATAGGAGATTGTGA 1641 0.4266 MALVNSFLLPTKSHLALHVSPPPSKKTLLCTSPSSNFSFNFNKALSSRRRKQSGCVAAASTLLDGEEDQKVLVGPSSEQERKGEREVVDYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNVVLFKDGNDKFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSPKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLSFEVTERTDRGFAGWWGREKDGSRPNFLRFEAPCVLQNNREIVDKNGEINHFSGLFLCRPTGQGKSMLIVRFGATKRSPLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSTAVKAFQTWKNVLSAVAVAFAALAILVSGRQWKVLLLASASLCSVGVYACSTAIAMNTTNFIRVHRRL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01473 546 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 96 201 IPR017941 GO:0051537
Vivi3g01473 546 Gene3D - 223 414 - -
Vivi3g01473 546 SUPERFAMILY ISP domain 89 210 IPR036922 GO:0051537
Vivi3g01473 546 CDD Rieske_RO_Alpha_Tic55 79 212 - -
Vivi3g01473 546 Gene3D - 91 220 IPR036922 GO:0051537
Vivi3g01473 546 Pfam Rieske [2Fe-2S] domain 95 177 IPR017941 GO:0051537
Vivi3g01473 546 Pfam Pheophorbide a oxygenase 300 385 IPR013626 GO:0010277
Vivi3g01473 546 SUPERFAMILY Bet v1-like 197 415 - -
Vivi3g01473 546 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 23 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01473 Vivi-Chr3 24335786 24339241 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01473 - - gmx:100808233 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01473 3 24335786 24339241 Vivi3g01473 3 24335786 24339241 ECH