Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01469 ATGGCTGGGTCTACTTGCGCTTCTTCTTGTTGCGCCTCTGCGCTCATTCCTAAATCAACACCTCGAATTTCATCGCTCCTTAACGGCAATGCAAGTTTCGTCAATAACCGAATTTCTCGCTTTCGAGTTAGGGTTTCCATGGTTGATTCTTCCTCCTCCGATTTTACTAAACGCATGGAGCAAGCTTGGTTAATCTCTCAGCAACCAAGACCAGTCGTGTGTTCATCTTGCAACTCAAAAGGGCATATTGAATGCAAATGGTGTGGAGGAACTGGTTTTTTGGTTCTTGGTGACCACATGCTTTGTGAAGTTCCATCCAGAAACACTAGTTGTATTATTTGCACTGGAAAGGGATCAATGTGCTGCTCAAATTGTCAAGGAACGGGCTTTCGTGCAAAGTGGTTGGAAGAGCCTCCTACATCCTAG 426 0.4507 MAGSTCASSCCASALIPKSTPRISSLLNGNASFVNNRISRFRVRVSMVDSSSSDFTKRMEQAWLISQQPRPVVCSSCNSKGHIECKWCGGTGFLVLGDHMLCEVPSRNTSCIICTGKGSMCCSNCQGTGFRAKWLEEPPTS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01469 141 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 41 130 - -
Vivi3g01469 141 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 71 131 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01469 Vivi-Chr3 24319991 24322316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01469 - - gmx:100810900 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01469 3 24319991 24322316 Vivi3g01469 3 24319991 24322316 ECH