Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01466 ATGGAGATTACAAAGCAGCAACTGAGCGCATACAACGGCACAGATCCATCGAAGCCGATATACGTCGCCGTGAAGGGTCGTGTGTTCGATGTCACCACCGGCAAATCGTTCTACGGTCCCGGCGGAGCCTACGCGATGTTCGCCGGCAGAGACGCGAGCAGAGCACTGGCGAAGATGAGCAAAAACGAAGAAGACATCACGTCGTCGCTGGATGGACTCACCGAGAAAGAGATCGGAGTTCTCAATGATTGGGAAACGAAGTTCGTCGCTAAGTACCCTGTTGTTGCAACGCTTGTTGATTGA 303 0.5314 MEITKQQLSAYNGTDPSKPIYVAVKGRVFDVTTGKSFYGPGGAYAMFAGRDASRALAKMSKNEEDITSSLDGLTEKEIGVLNDWETKFVAKYPVVATLVD 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01466 100 FunFam membrane-associated progesterone receptor component 1 1 100 - -
Vivi3g01466 100 SMART Cyt_b5_2 3 99 IPR001199 -
Vivi3g01466 100 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 99 IPR036400 -
Vivi3g01466 100 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 2 99 - -
Vivi3g01466 100 Gene3D - 1 100 IPR036400 -
Vivi3g01466 100 Pfam Cytochrome b5-like Heme/Steroid binding domain 4 76 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01466 Vivi-Chr3 24216719 24217340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01466 K17278 - gmx:100779765 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01466 3 24216719 24217340 Vivi3g01466 3 24216719 24217340 ECH