Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01452 ATGGCGTTTGAGTACAGAGAGCTGCAAGATCAGCTTTTGGATGTTGGGAGAAAGCTGGCGGATCCTCCTGCGTCGGTGGATCAGCTCATCTCGCTGCTAACTCGAGCTGATAGTTGCTTAGCACGGGTGGAACAGTCACCTAAAGACTCTATGCGAAAAGCACTCGATCCGACGTTGAAAGCATTGGTTGAGCATAGGCTTTTAAGGCATCCGGATACTGATGTCCAAGTTGCACTTGCCTCTTGCATCACCGAAATAACAAGAATCACTGCGCCTGATGCTCCTTATGATGATGATCAAATGAAGGAGATATTTCAATTAGTTGTATCTTCATTTGAAAAGCTACATGATATCTCAAGCCGATCTTATGCGAAGAGGAGGGCAATTCTGGAAACGGTTGCCAAAGTCAGATCATGCGTGGTAATGCTGGACCTTGAATGTGATGGGCTGATTTTGGAGATGTTTCAGCACTTTTTAAAGGCAATAAGGGAACATCATCCAGAGAATGTTTTTTCATCCATGGAAACCATTATGACACTTGTCCTAGAGGAAAGTGAAGAAATATCCTTTGATTTGCTTTCTCCTCTCCTGGACAGCATTAAGAAAGACAATGAGGAAGTATCACCGATTGCCCGGAAATTGGCAGAGAGGGTTATTGAAAATTGTACAACCAAACTTAAACCCTACTTAGTGCAAGCAGTGAGAATGTTGGATATATCTGTGGATGATTATAGCAAAGTACTTGCTTCAATATGCCAAGATACCTGTGATAGCTTGGAGAAAAATGGTGTATGTGTTACTAGTGACCACAAGGAAGAGGAGATCAAGTCAGCAGAACTACCGCCTGAGGAGTCAAGCCCAGAAGACGAGACCAAGTCAGCTGAACTACCACTTGAGGAGTCAAGCCCAGTGGTGGTTAAAGAGGAAGATGCACATTCTCCACAAGATAACCAGGAGGGGAATAGATCTTCCAAGTCAGTCACAAACAATGGCGTTGCATCAGCTGGAGAAGACGCCACTTTAGGAGATCATAAGTCCATTACAAAGACAGAAGATACCGATTTTTCTGATCATTCCAAAGAGGAGCTCAATGATTTGGGTGATGGAAAAGTTGACAAGAATGAACGAAAACCGGAACAAGCCACCAAAAAGAGCCGGAGGAAATCGAGCTCTTCAACCAAATCTGCAAAACTGTCTCAATGTCAAGTTGTTGCTAATGAAAAGAAAGCTGAGAAAATGTTGGATTCTGAAAGTTACAGCAAGGAAGCTCACAATGATGAATCTGAAGTTGTGGCTTCTCTTTCACCTAGTGACAGCCTTCCTGACGAAAATCATTCAGAGAAACTTGGAAAAGCAAAAACTAAAGGAAGCCCTGCAAATGTTGAAGTTGTTTCGAAAAAGATATCTGAAGGAGCAAGTATATCAAAAGCCAAACCTGTCAAGCGGCCAGTGAAAAAGACACTTGGTCGAAGCTCTGGTGTAAAAAAAACTGCTGGTACAGATTCAGACAAAACACAAAGTGGGGCTGTTAGTAGTGCTGATGCTAAAAAGCACTCTGCCAAGAAATTGAATGATAACGAGGGTGGTGGTGGTGGATCCTCTTCCAGACAGCTTGTAGATGAGAAAAAGTTGGGGTGGGGGGAAGCTAACTCAGAGACGGGTGCAGCAAAGTCTTCTAGTGTAGGTGTTGATAAGGAAATGGTTTCTTCTCCAAGGTCCGATACCAAATCCTCCGAAAATGAAAAGTTAGAGGAGACTACCAAGACAAGTGCAAAGAGGAAACATGCCTTAGAAGATGAAAAGTTAGAGGAGACTCCCAAAACTAGTGCAAAGAGGAAACCCGCCGAAGATGAAAAGTTAGGGGAGACTCCCAAAACAAGTGCAAAGAGGAAACCCGCTTCAGGAAGAAAAAATGGATCTGGGGTCAAGGAATACGGTGAAAACCTTGTTGGTCTACGAGTTGAAGTATGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTCATTGAACGTTTTGATCCTATAAAAAAGAAGCACAAGGTGGTTTATGATGATGGTGAAGTTGAAGTATTAAACCTCTCTAGGCAAAAATGGAATATCATTGAAGCTGATTCAGTTGCAGATGGGGAAGAAGGAAGTGATCATGCTAGTCTCGATGCTTCCCCTGAAATGCCTACAAAAAAGAAAGGAAAAACAAGTTTCGGTGAACCAACTAAGCATGGAAAGCTGTCCTCGAGTGGCGGAGCATCAGGATCAAGTAAATCAAAGGGTGTTTTGATGTCTGGTCAGAAGTCTAAGGATGGAAACAAATCCAAAGAATCCAATACTGTTAGCGATTCTGAGGATGAAGTTAGCAGAAAGTTTAAGGACAACACTCCTGCATCTGCTGCACCGAAAATAACTAGTAAGTCCAAGAACATTGGTAGTTCCAAGACAAGCAAGCCAAAGGATAACGACACTATCACTCCAAAACCCTCTGTCAAGTCCAAGCAGGAAACGTCAAAGAGTGGAGCAACCAACCAAAAGACCCCAAAGACTGCTGCTTCTGAGGGAAAGCCCCCAAATAGTGGCGGAAAGTCTAGTGTCGACCGTGGTGGCAAGTTGAAATCTGGTTCATTGAAGAAAAGAGTTTTGGAGGATGATGACTCAGATGATTCAGCAAGAGAGGAGGAATATACAAAGGGCAAGACATCAGGTTCATCAAAGGCAGAAGGAAGTGAGGTCAAGAGGGGAAATAAACGTCAGAGAAGCTAG 2754 0.4332 MAFEYRELQDQLLDVGRKLADPPASVDQLISLLTRADSCLARVEQSPKDSMRKALDPTLKALVEHRLLRHPDTDVQVALASCITEITRITAPDAPYDDDQMKEIFQLVVSSFEKLHDISSRSYAKRRAILETVAKVRSCVVMLDLECDGLILEMFQHFLKAIREHHPENVFSSMETIMTLVLEESEEISFDLLSPLLDSIKKDNEEVSPIARKLAERVIENCTTKLKPYLVQAVRMLDISVDDYSKVLASICQDTCDSLEKNGVCVTSDHKEEEIKSAELPPEESSPEDETKSAELPLEESSPVVVKEEDAHSPQDNQEGNRSSKSVTNNGVASAGEDATLGDHKSITKTEDTDFSDHSKEELNDLGDGKVDKNERKPEQATKKSRRKSSSSTKSAKLSQCQVVANEKKAEKMLDSESYSKEAHNDESEVVASLSPSDSLPDENHSEKLGKAKTKGSPANVEVVSKKISEGASISKAKPVKRPVKKTLGRSSGVKKTAGTDSDKTQSGAVSSADAKKHSAKKLNDNEGGGGGSSSRQLVDEKKLGWGEANSETGAAKSSSVGVDKEMVSSPRSDTKSSENEKLEETTKTSAKRKHALEDEKLEETPKTSAKRKPAEDEKLGETPKTSAKRKPASGRKNGSGVKEYGENLVGLRVEVWWPKDREFYKGVIERFDPIKKKHKVVYDDGEVEVLNLSRQKWNIIEADSVADGEEGSDHASLDASPEMPTKKKGKTSFGEPTKHGKLSSSGGASGSSKSKGVLMSGQKSKDGNKSKESNTVSDSEDEVSRKFKDNTPASAAPKITSKSKNIGSSKTSKPKDNDTITPKPSVKSKQETSKSGATNQKTPKTAASEGKPPNSGGKSSVDRGGKLKSGSLKKRVLEDDDSDDSAREEEYTKGKTSGSSKAEGSEVKRGNKRQRS 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01452 917 MobiDBLite consensus disorder prediction 552 566 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 708 736 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 738 765 - -
Vivi3g01452 917 Gene3D - 647 697 - -
Vivi3g01452 917 Coils Coil 580 600 - -
Vivi3g01452 917 SUPERFAMILY Tudor/PWWP/MBT 648 687 - -
Vivi3g01452 917 CDD Tudor_Agenet_AtEML-like 650 698 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 824 856 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 569 626 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 493 513 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 766 789 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 269 645 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 342 386 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 795 816 - -
Vivi3g01452 917 Pfam Sister chromatid cohesion protein PDS5 protein 27 232 - -
Vivi3g01452 917 SMART TUDOR_7 646 705 IPR002999 -
Vivi3g01452 917 SUPERFAMILY ARM repeat 34 237 IPR016024 -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 269 316 - -
Vivi3g01452 917 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 268 885 IPR039776 GO:0007064
Vivi3g01452 917 MobiDBLite consensus disorder prediction 317 335 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 868 897 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 408 428 - -
Vivi3g01452 917 MobiDBLite consensus disorder prediction 704 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01452 Vivi-Chr3 23900241 23907296 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01452 - - psat:127087777 1572.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01452 3 23900241 23907296 Vivi3g01452 3 23900241 23907296 ECH