Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01451 ATGGCGTTTGAGTACAGAGAGCTGCAAGATCAGCTTTTGGATGTTGGGAGAAAGCTGGCGGATCCTCCTGCGTCGGTGGATCAGCTCATCTCGCTGCTAACTCGAGCTGATAGTTGCTTAGCACGGGTGGAACAGTCACCTAAAGACTCTATGCGAAAAGCACTCGATCCGACGTTGAAAGCATTGGTTGAGCATAGGCTTTTAAGGCATCCGGATACTGATGTCCAAGTTGCACTTGCCTCTTGCATCACCGAAATAACAAGAATCACTGCGCCTGATGCTCCTTATGATGATGATCAAATGAAGGAGATATTTCAATTAGTTGTATCTTCATTTGAAAAGCTACATGATATCTCAAGCCGATCTTATGCGAAGAGGAGGGCAATTCTGGAAACGGTTGCCAAAGTCAGATCATGCGTGGTAATGCTGGACCTTGAATGTGATGGGCTGATTTTGGAGATGTTTCAGCACTTTTTAAAGGCAATAAGGGAACATCATCCAGAGAATGTTTTTTCATCCATGGAAACCATTATGACACTTGTCCTAGAGGAAAGTGAAGAAATATCCTTTGATTTGCTTTCTCCTCTCCTGGACAGCATTAAGAAAGACAATGAGGAAGTATCACCGATTGCCCGGAAATTGGCAGAGAGGGTTATTGAAAATTGTACAACCAAACTTAAACCCTACTTAGTGCAAGCAGTGAGAATGTTGGATATATCTGTGGATGATTATAGCAAAGTACTTGCTTCAATATGCCAAGATACCTGTGATAGCTTGGAGAAAAATGGTGTATGTGTTACTAGTGACCACAAGGAAGAGGAGATCAAGTCAGCAGAACTACCGCCTGAGGAGTCAAGCCCAGAAGAAGAGAGCAAGTCAGCAGAACTACCGCCTGAGGAGTCAAGCCCAGAAGACGAGACCAAGTCAGCTGAACTACCACTTGAGGAGTCAAGCCCAGTGGTGGTTAAAGAGGAAGATGCACATTCTCCACAAGATAACCAGGAGGGGAATAGATCTTCCAAGTCAGTCACAAACAATGGCGTTGCATCAGCTGGAGAAGACGCCACTTTAGGAGATCATAAGTCCATTACAAAGACAGAAGATACCGATTTTTCTGATCATTCCAAAGAGGAGCTCAATGATTTGGGTGATGGAAAAGTTGACAAGAATGAACGAAAACCGGAACAAGCCACCAAAAAGAGCCGGAGGAAATCGAGCTCTTCAACCAAATCTGCAAAACTGTCTCAATGTCAAGTTGTTGCTAATGAAAAGAAAGCTGAGAAAATGTTGGATTCTGAAAGTTACAGCAAGGAAGCTCACAATGATGAATCTGAAGTTGTGGCTTCTCTTTCACCTAGTGACAGCCTTCCTGACGAAAATCATTCAGAGAAACTTGGAAAAGCAAAAACTAAAGGAAGCCCTGCAAATGTTGAAGTTGTTTCGAAAAAGATATCTGAAGGAGCAAGTATATCAAAAGCCAAACCTGTCAAGCGGCCAGTGAAAAAGACACTTGGTCGAAGCTCTGGTGTAAAAAAAACTGCTGGTACAGATTCAGACAAAACACAAAGTGGGGCTGTTAGTAGTGCTGATGCTAAAAAGCACTCTGCCAAGAAATTGAATGATAACGAGGGTGGTGGTGGTGGATCCTCTTCCAGACAGCTTGTAGATGAGAAAAAGTTGGGGTGGGGGGAAGCTAACTCAGAGACGGGTGCAGCAAAGTCTTCTAGTGTAGGTGTTGATAAGGAAATGGTTTCTTCTCCAAGGTCCGATACCAAATCCTCCGAAAATGAAAAGTTAGAGGAGACTACCAAGACAAGTGCAAAGAGGAAACATGCCTTAGAAGATGAAAAGTTAGAGGAGACTCCCAAAACTAGTGCAAAGAGGAAACCCGCCGAAGATGAAAAGTTAGGGGAGACTCCCAAAACAAGTGCAAAGAGGAAACCCGCTTCAGGAAGAAAAAATGGATCTGGGGTCAAGGAATACGGTGAAAACCTTGTTGGTCTACGAGTTGAAGTATGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTCATTGAACGTTTTGATCCTATAAAAAAGAAGCACAAGGTGGTTTATGATGATGGTGAAGTTGAAGTATTAAACCTCTCTAGGCAAAAATGGAATATCATTGAAGCTGATTCAGTTGCAGATGGGGAAGAAGGAAGTGATCATGCTAGTCTCGATGCTTCCCCTGAAATGCCTACAAAAAAGAAAGGAAAAACAAGTTTCGGTGAACCAACTAAGCATGGAAAGCTGTCCTCGAGTGGCGGAGCATCAGGATCAAGTAAATCAAAGGGTGTTTTGATGTCTGGTCAGAAGTCTAAGGATGGAAACAAATCCAAAGAATCCAATACTGTTAGCGATTCTGAGGATGAAGTTAGCAGAAAGTTTAAGGACAACACTCCTGCATCTGCTGCACCGAAAATAACTAGTAAGTCCAAGAACATTGGTAGTTCCAAGACAAGCAAGCCAAAGGATAACGACACTATCACTCCAAAACCCTCTGTCAAGTCCAAGCAGGAAACGTCAAAGAGTGGAGCAACCAACCAAAAGACCCCAAAGACTGCTGCTTCTGAGGGAAAGCCCCCAAATAGTGGCGGAAAGTCTAGTGTCGACCGTGGTGGCAAGTTGAAATCTGGTTCATTGAAGAAAAGAGTTTTGGAGGATGATGACTCAGATGATTCAGCAAGAGAGGAGGAATATACAAAGGGCAAGACATCAGGTTCATCAAAGGCAGAAGGAAGTGAGGTCAAGAGGGGAAATAAACGTCAGAGAAGCTAG 2802 0.435 MAFEYRELQDQLLDVGRKLADPPASVDQLISLLTRADSCLARVEQSPKDSMRKALDPTLKALVEHRLLRHPDTDVQVALASCITEITRITAPDAPYDDDQMKEIFQLVVSSFEKLHDISSRSYAKRRAILETVAKVRSCVVMLDLECDGLILEMFQHFLKAIREHHPENVFSSMETIMTLVLEESEEISFDLLSPLLDSIKKDNEEVSPIARKLAERVIENCTTKLKPYLVQAVRMLDISVDDYSKVLASICQDTCDSLEKNGVCVTSDHKEEEIKSAELPPEESSPEEESKSAELPPEESSPEDETKSAELPLEESSPVVVKEEDAHSPQDNQEGNRSSKSVTNNGVASAGEDATLGDHKSITKTEDTDFSDHSKEELNDLGDGKVDKNERKPEQATKKSRRKSSSSTKSAKLSQCQVVANEKKAEKMLDSESYSKEAHNDESEVVASLSPSDSLPDENHSEKLGKAKTKGSPANVEVVSKKISEGASISKAKPVKRPVKKTLGRSSGVKKTAGTDSDKTQSGAVSSADAKKHSAKKLNDNEGGGGGSSSRQLVDEKKLGWGEANSETGAAKSSSVGVDKEMVSSPRSDTKSSENEKLEETTKTSAKRKHALEDEKLEETPKTSAKRKPAEDEKLGETPKTSAKRKPASGRKNGSGVKEYGENLVGLRVEVWWPKDREFYKGVIERFDPIKKKHKVVYDDGEVEVLNLSRQKWNIIEADSVADGEEGSDHASLDASPEMPTKKKGKTSFGEPTKHGKLSSSGGASGSSKSKGVLMSGQKSKDGNKSKESNTVSDSEDEVSRKFKDNTPASAAPKITSKSKNIGSSKTSKPKDNDTITPKPSVKSKQETSKSGATNQKTPKTAASEGKPPNSGGKSSVDRGGKLKSGSLKKRVLEDDDSDDSAREEEYTKGKTSGSSKAEGSEVKRGNKRQRS 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01451 933 Gene3D - 663 713 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 269 661 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 724 752 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 568 582 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 754 781 - -
Vivi3g01451 933 CDD Tudor_Agenet_AtEML-like 666 714 - -
Vivi3g01451 933 Coils Coil 596 616 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 840 872 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 269 332 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 509 529 - -
Vivi3g01451 933 SUPERFAMILY Tudor/PWWP/MBT 664 703 - -
Vivi3g01451 933 SMART TUDOR_7 662 721 IPR002999 -
Vivi3g01451 933 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 265 901 IPR039776 GO:0007064
Vivi3g01451 933 MobiDBLite consensus disorder prediction 585 642 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 811 832 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 358 402 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 782 805 - -
Vivi3g01451 933 Pfam Sister chromatid cohesion protein PDS5 protein 27 232 - -
Vivi3g01451 933 SUPERFAMILY ARM repeat 34 237 IPR016024 -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 333 351 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 720 933 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 424 444 - -
Vivi3g01451 933 MobiDBLite consensus disorder prediction 884 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01451 Vivi-Chr3 23900241 23907296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01451 - - psat:127087777 1566.98