Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01450 ATGGCGCTTGGATTCTTCGCTCTCGCTATTTTTCTCTTTCTCACTCTCGATCCTGATGTTTCTCCTTCCTCCACCGCTTCTGCTTCCGCTGCTTCCTCCGAAGGCGTCGAGGTTCAGATTACTTATGGTTCGGTTATAAAGCTTATGCATGAGAAGACCAAATTTAGGTTGCATTCTCATGATGTGCCCTATGGTTCTGGCAGTGGCCAGCAATCGGTTACTGGTTTTCCTACTGTTGATGATGCCAACAGTTACTGGATTGTTAGGCCTGAGCCAGGAACTTCAGCTAAACAAGGTGACACCATTAAAAGTGGCACAATTGTTAGATTTCAGCACATGAGGACAAGGAAGTGGTTGCACAGCCATTTGCATGCATCCCCAATATCAGGCAATCTCGAGGTCAGCTGCTTTGGTGGAGAAAATGATTCTGACACTGGGGACTATTGGAGGCTTTTTATAGAAGGAAGTGGAAAGACTTGGAAGCAGGATCAAAAGATTCGGCTTCAGCATGTTGACACTTCAGGCTATCTACATAGTCATGATAAGAAATACAGTCGGATTGCAGGTGGACAGCAGGAGGTTTGTGGTGTTCGGGAAAAGCGCGCTGACAATATCTGGTTGGCAGCTGAAGGTGTCTATCTTCCTGTTACTGAAAGCAAACAAGTTGAGTAG 672 0.4598 MALGFFALAIFLFLTLDPDVSPSSTASASAASSEGVEVQITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPTVDDANSYWIVRPEPGTSAKQGDTIKSGTIVRFQHMRTRKWLHSHLHASPISGNLEVSCFGGENDSDTGDYWRLFIEGSGKTWKQDQKIRLQHVDTSGYLHSHDKKYSRIAGGQQEVCGVREKRADNIWLAAEGVYLPVTESKQVE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01450 223 Gene3D - 23 221 - -
Vivi3g01450 223 SUPERFAMILY MIR domain 38 211 IPR036300 -
Vivi3g01450 223 ProSiteProfiles MIR domain profile. 99 154 IPR016093 -
Vivi3g01450 223 ProSiteProfiles MIR domain profile. 37 91 IPR016093 -
Vivi3g01450 223 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 220 - -
Vivi3g01450 223 FunFam Stromal cell-derived factor 2-like protein 23 221 - -
Vivi3g01450 223 SMART mir_2 99 154 IPR016093 -
Vivi3g01450 223 SMART mir_2 157 211 IPR016093 -
Vivi3g01450 223 SMART mir_2 37 91 IPR016093 -
Vivi3g01450 223 ProSiteProfiles MIR domain profile. 157 211 IPR016093 -
Vivi3g01450 223 Pfam MIR domain 71 204 IPR016093 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01450 - - lja:Lj1g3v1819850.2 394.43