Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01438 ATGTCATCTTCTCCTTTTCCTTCTTGTTTCCGTCCCTCTCCAACCACCGACGACCACCGTCTTTCCTCACCACCTCCGCCGCCCCCGCCGCCGCATTCAACCAACCCTAACCTCGCCACCTATCTTTACCAAACCGACATCGGCTTAGTTTCTTTGACTTGGTCACGTTCCATCCTAGGTCGTTCTCTCCACGTTCAACTCCATCACCATCCCTTCGATTCTCCACCTAACCCTTCTTCTTCCTCCTTCCATCTCCACATCAAACCGTTCATCTTCTGGAAGAAACACGGCACGAAGAAACTCTCTGCGAATACTCACCTTTTCTGGAACCTCTCGAAAGCGAAATTCGGGTCAGGACCCGAACCGAACTCCGGTTTCTACGTCGCGGTTGTCGTCGACAACGAGATGACGCTTCTGGTCGGAGATTCAAACAAAGACGCGTACGCGAAGTCCAAATCCAAAGAACCGAAGAAGAATCATAGTCAGTATCTCGTGATGAAGAGAGAGCATGTTTACGCTAACAAAATCTACAACACGAGAGCGAGATTCGGAGGTAAAATGAGAGATATTCAGATAGATTGCGGTGGAAGAGATCACTCGAAGCTTTGTTTCAGCGTTGATGGAACGAAAGTGTTGCAGATAAAGAGACTGAAATGGAAGTTCAGAGGAAATGAAAGAGTTGAAATATGCGGTGTGCCGGTTCAGATCTCGTGGGATGTTTATAACTGGTTGTTTGTGAAAGATAACAGCGAGGGTCACGCGATTTTCATGTTCAAATTTGAAGAGGATGAAGAGGAACAACATGACAGTGTTAAAGACAAGAGTTTGATGAGTTTGTGGACTCAGCAGAATGTGAATTTGGGAGGGTATGAGGTGGGGAAAATGGGTAAGAGTTGGTCTTCTTCGTCGGTTTCGATGGCGTCTTCCGGTGGATCTTTTGGGGCGAGTTCATCGGTTTTGGAATGGTCGAGTGTTGAGGAGAATGAATTGGTTGTTCCTGTTGGGTTTTCTTTGCTTGTTTATGCATGGAAACGATGA 1038 0.4692 MSSSPFPSCFRPSPTTDDHRLSSPPPPPPPPHSTNPNLATYLYQTDIGLVSLTWSRSILGRSLHVQLHHHPFDSPPNPSSSSFHLHIKPFIFWKKHGTKKLSANTHLFWNLSKAKFGSGPEPNSGFYVAVVVDNEMTLLVGDSNKDAYAKSKSKEPKKNHSQYLVMKREHVYANKIYNTRARFGGKMRDIQIDCGGRDHSKLCFSVDGTKVLQIKRLKWKFRGNERVEICGVPVQISWDVYNWLFVKDNSEGHAIFMFKFEEDEEEQHDSVKDKSLMSLWTQQNVNLGGYEVGKMGKSWSSSSVSMASSGGSFGASSSVLEWSSVEENELVVPVGFSLLVYAWKR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01438 345 Pfam Plant protein of unknown function (DUF868) 35 344 IPR008586 -
Vivi3g01438 345 MobiDBLite consensus disorder prediction 1 18 - -
Vivi3g01438 345 PANTHER EXPRESSED PROTEIN 6 344 IPR008586 -
Vivi3g01438 345 MobiDBLite consensus disorder prediction 1 36 - -
Vivi3g01438 345 MobiDBLite consensus disorder prediction 19 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01438 Vivi-Chr3 23400905 23402875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01438 6 266 EF-hand Containing Proteins AT5G28150 36.531 4.69e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01438 - - psat:127087751 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01438 3 23400905 23402875 Vivi3g01438 3 23400905 23402875 ECH
Vivi3g01438 3 23400905 23402875 Vivi3g01438 3 23400905 23402875 PCT