Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01404 ATGGAGATTCGTTATGGAAAATTGTTTTCTCCGATTTTGATATTGCTCTTACTAGCATCTTTCGCCGTGATTTTCATCGCGCTTCCTTTGAATTTGATGAGATTCGTCGTCGACTTGAAGCCGACATTCTCCATTTCACTTCAGAACTTACGAACAAAGGTTTCCGGTGAAGATGATTTGCTCCTCGCCGTTGAACACGGCGGTCAGTCAAACAGCACCGTAGCGAGGGAGGTGAGAAAAGTGATCAAGAGTAAAGAAGAGAAGCGAGAAGAAGAGCTCGCTCGAGCGAGAGATGCAATGCGAAAAGCTGCATTAGGAGATCGTAGAAGAAATCTGACTCCGTCGTCAACATCACGCGACGACGATTACGTTTCCGGTGAAGCTGTTTATCTCAACCCGCGCTTATTTTATCAAAGTTACTTGGAGATGGAGAAGATATTCAAGGTGTATGTATACCCAGATGGGGACCTACCAATTGTTCATGATGGCCCATGTAAGGACATATACTCCATTGAAGGAAGGTTCCTCCATGAAATTGAATACGGAGTTGGGAAATTTAGAACCAATGATCCTAATGCAGCTCACGTTTACTTTTTACCATTCAGTGTCACATGGATGGTGAAATACTTCTATACACCATCTTCTTACGATCTCACTCCTTTAAAGCAGTTTGTCTCTGATTACGTGAATGTAATATCCATGAGACACCCCTTCTGGAACAAAACTCATGGTGCTGACCACTTCATGCTTGCTTGCCATGATTGGGGTCCATTTGCAGCAAAGGGCAATCCTTTCCTTTACAATACCTCAATCCGTGTCTTGTGCAATGCCAACACTTCTGAAGGTTTCGATCCTCTAAAGGATGTATCTTTACCAGAAATTTACCTATATGGAGGTGAAGTATCTCCTAAACTTCTTACACCACCACCCGACTTCGCCCCACGAAGGTATCTAGCCTTCTTCGCAGGCGGTTTGCACGGCCCAATTCGCCCGATTCTTCTCCAGCACTGGAAAAACAAAGACAGCGATATCGCCGTGTATGAATATCTCCCTAAAGGCATGGACTACTATTCCTTCATGCTAAACTCTAAGTACTGCCTTTGTCCAAGTGGCCATGAAGTGGCTAGTCCAAGAATTGTGGAGTCAATTTATGCAGAATGTGTGCCTGTGATTCTATCGAATTTTTATGTGTTACCCTTCAGTGATGTGTTGAAATGGGAGGCATTTTCAGTGCAGGTGGATGTTTCAGATATTCCTAGGTTGAAAGAGATTCTTAGTGGTATTCCGGAGAAGAAGTATAGGAAACTCAAAAATGGAGTAAGGGCTGTGAGGAAACACTTTACTCTGAATCAACCTGCTAAAAGATTTGATGTTTTTCACATGATCTTACACTCAATATGGCTGAGGAGATTGAATATAAAACTCGGATAG 1431 0.4298 MEIRYGKLFSPILILLLLASFAVIFIALPLNLMRFVVDLKPTFSISLQNLRTKVSGEDDLLLAVEHGGQSNSTVAREVRKVIKSKEEKREEELARARDAMRKAALGDRRRNLTPSSTSRDDDYVSGEAVYLNPRLFYQSYLEMEKIFKVYVYPDGDLPIVHDGPCKDIYSIEGRFLHEIEYGVGKFRTNDPNAAHVYFLPFSVTWMVKYFYTPSSYDLTPLKQFVSDYVNVISMRHPFWNKTHGADHFMLACHDWGPFAAKGNPFLYNTSIRVLCNANTSEGFDPLKDVSLPEIYLYGGEVSPKLLTPPPDFAPRRYLAFFAGGLHGPIRPILLQHWKNKDSDIAVYEYLPKGMDYYSFMLNSKYCLCPSGHEVASPRIVESIYAECVPVILSNFYVLPFSDVLKWEAFSVQVDVSDIPRLKEILSGIPEKKYRKLKNGVRAVRKHFTLNQPAKRFDVFHMILHSIWLRRLNIKLG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01404 476 Coils Coil 75 102 - -
Vivi3g01404 476 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 37 466 IPR004263 GO:0006486|GO:0016757
Vivi3g01404 476 Pfam Exostosin family 145 426 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01404 Vivi-Chr3 22890271 22893943 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01404 - - gmx:100820065 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01404 3 22890271 22893943 Vivi3g01404 3 22890271 22893943 ECH
Vivi3g01404 3 22890271 22893943 Vivi3g01404 3 22890271 22893943 PCT