Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01395 ATGCAGAGACGAAGTCCTCCCAAGCATAGACACGATGGGACTTCGCCGCTGCCTCTTGGCATGGATTGGAGTCCTGCTCCTCGAAAATGGAATGGACGGGAAACAGAATGGCCACACAATCATCGTACAGGTTGGAGTTATTGCGTCGTAATACCTTCTTGGGTCTTCGTGCCAAAATCAAGGAATTCAGATCCTATAGTGTTCTACAGGCTTCAAGTTGGTATACAATCACCAGAAGGGATTACAAATATCCATGGAGTACTAAGAAGGTTCAATGATTTTATAAAGTTGTATGTTGATCTTAAAAAGGAGTTCTCCGGGAAAAATATCCCTCCAGCACCACCCAAGGGACTCTTGCGATTAAAAAGTCGAGCTTTGTTGGAAGAGAGAAGGCGCTCTTTGGAGGAGTGGATCACCAAACTGTTGTCTGACATTGATATCTCAAGATGTGCTCCCGTGGCATCATTTCTTGAGCTAGAAACTGCTGCCAGATCTTCATTTCAAGATGCAAGCCAGCAGAATTCAGTAACAGATCCTGATTCTAATAACAGAGATAATTCGTTGCAATCATCTCTCCATTCGAACTTATCATTAGCTGCTGGAAGTTCATCTGTTGCGTCAGATTATGGTAGTGATACTCCATATGATGCATCTGAAGTAGGAACTCCGAGAATTGGACGAGATGATAACTCCGAGGTTGGGACAGATGATCTGACATTAGATGAAGATATGACGAATCCAATAGAAAGGCTTGTAAAATATGGTATATCGAATATTGATGAGGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTAGAAGGACTTCCTAGGCATAAAGTAAATGCCAGACATATGAACAATGTTACAGTGAAGGACAGAAGTAATGGTAATTCATATGATTCTTCACTTCTAGCTAATAATACCATGGAACGTTTCTCTGAGGCTGGACATGCTAAAGTTTTTGGTCACATTCGTAAGCTTTCAAATGAGAGTGTTGGAAGTGATGGAAGCTCAATACGAGGTAGTGACATGTCTAATTTTGGGATTCCAAATTCATCTGGTGATGGCTCTGTTGACCTTCCTGGATGTGCCTCAGTTTCAAGAGAAACAGATATTGCAGGCCACAAGTTGAAGTGTACCGAGGATGCTCAATTAGTCATTCCGCTAGATCAACGCAATAAACTGAACAGGATACTTTCAACCATGCAGAGAAGACTAGTCACAGCGAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCGAAGGATTTTCTTACAACAAAGGTCAAGGATGTGGAAGGTGAACTTGAAACAACCAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTGATTGAGAGAGAAAGATTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAGTCACTGGAAATGGAGATGAAACTCAAGTCTGAATCAGATGCAAATGCTGGTCAGAATTTGACAAAATCAATTGTCCATCAGAACGATGTGCTGTTGCAGGATTTAGATGCTGCTAGAGAGCAGCTGGAAATTTTGTCAAAACAGTATGTAGAGCTAGAAGCAAAATCGAAAGCAGATATTAAAGTTCTTGTTAAAGAAGTCAAATCTCTCCGCAGCTCCCAAACAGAATTGAAGAAGGAACTTAGTGAGTCCATAAAGGAGAAACGTGAAGCGGAGAAACTACTACTTCATGAAAGAGAGAAGAGGGAACAAGCAGAAACAGCTTCTAGAGAATTGCTTGAGAAATGTGGCCTTCTTTTTAAGCAGCTTCAAGAGTGCAATGTCAATCTTCCTTACAATGATGAGGATAGGACAGTCTTGCATTCATCAACTTCAACTGATGCTTTTAATCTATTAAAGACATCTGATGACCAAATCGACATCCTACTAGCAGAGGTAAAAAACTTAGAGAAGGACTACGGCAATGCAGCTTTTATTGTAGATAAAACCAATGACATACAAGATGGTGTAATATGTGGTGATGAAATGAGAAAGATCATAGCAGATTTGTTCGCTGATAATGTACGATTGAGAAAACAAACAAACCAGATTACAAGGCATGCTCTCAAATTGGATATGACAACGAGTGTTGATTCTCCTTCAATTGAAAATGTAACAAATAGTTAG 2157 0.401 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRETEWPHNHRTGWSYCVVIPSWVFVPKSRNSDPIVFYRLQVGIQSPEGITNIHGVLRRFNDFIKLYVDLKKEFSGKNIPPAPPKGLLRLKSRALLEERRRSLEEWITKLLSDIDISRCAPVASFLELETAARSSFQDASQQNSVTDPDSNNRDNSLQSSLHSNLSLAAGSSSVASDYGSDTPYDASEVGTPRIGRDDNSEVGTDDLTLDEDMTNPIERLVKYGISNIDEGLFMGQTILEQLEGLPRHKVNARHMNNVTVKDRSNGNSYDSSLLANNTMERFSEAGHAKVFGHIRKLSNESVGSDGSSIRGSDMSNFGIPNSSGDGSVDLPGCASVSRETDIAGHKLKCTEDAQLVIPLDQRNKLNRILSTMQRRLVTAKTDMEDLIVRLNQEIAAKDFLTTKVKDVEGELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESDANAGQNLTKSIVHQNDVLLQDLDAAREQLEILSKQYVELEAKSKADIKVLVKEVKSLRSSQTELKKELSESIKEKREAEKLLLHEREKREQAETASRELLEKCGLLFKQLQECNVNLPYNDEDRTVLHSSTSTDAFNLLKTSDDQIDILLAEVKNLEKDYGNAAFIVDKTNDIQDGVICGDEMRKIIADLFADNVRLRKQTNQITRHALKLDMTTSVDSPSIENVTNS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01395 718 Coils Coil 537 585 - -
Vivi3g01395 718 Coils Coil 471 491 - -
Vivi3g01395 718 MobiDBLite consensus disorder prediction 167 189 - -
Vivi3g01395 718 FunFam Phox (PX) domain-containing protein 46 183 - -
Vivi3g01395 718 Coils Coil 629 649 - -
Vivi3g01395 718 Gene3D - 51 185 IPR036871 GO:0035091
Vivi3g01395 718 MobiDBLite consensus disorder prediction 203 240 - -
Vivi3g01395 718 Coils Coil 505 532 - -
Vivi3g01395 718 SMART PX_2 43 160 IPR001683 GO:0035091
Vivi3g01395 718 Coils Coil 428 455 - -
Vivi3g01395 718 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 709 IPR044588 GO:0015031
Vivi3g01395 718 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Vivi3g01395 718 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Vivi3g01395 718 MobiDBLite consensus disorder prediction 1 25 - -
Vivi3g01395 718 Pfam PX domain 86 158 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01395 Vivi-Chr3 22720001 22729074 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01395 - - gmx:100792151 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01395 3 22720001 22729074 Vivi3g01395 3 22720001 22729074 ECH