Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01351 ATGTCTCACAAACCATCTTATTCATCGGAGAACATGCTTCCGGTGTCAGATCCTCCGAACGACGAAGACCGAGAGAGGCTTCTCCAAGGCGATGATAAGATCTTTAGAGGTTCTTCCATGACTAGACGAGGAGTTTTCGCTGCTATCTCTTACATGTCTTGCGCTGTGCTATTGGTGATGTTTAATAAAGCAGCTCTTTCATCGTATAACTTTCCATCTGCAAATTTCATTGCACTTCTTCAGATGGTATGTTCGTGTTGTTTTCTCTATGTATTGAGGCGCAGGAGGATAATTTCTTTCACATCTGGTGAAGCTGCAATTATATCAGAAAACTCTAAAATATTTGTGCCATTGAAGACTTTGAGGCACGCTTTTCCTATTGCAGGATCATATTTACTTTATATGTTAGTCACTATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTATACCACCCTTAGGAGGACCACTGTAGTATTTACAATGCTTGTGGAGTTTATACTGGTGGGGCAACGGTATACACGTTCTATAATTTTCAGTGTTGGCTTGATTGTCTTTGGTGCATTTATCGCTGGAGCGCGAGACTTATCTTTTGATGCCTACGGTTATGCCATTGTTTTCCTGTCAAACATCGCTACAGCTATATATCTTGCAACGATAGCCCGTGTTGGAAAAACTAGTGGCCTTAATAGCTTTGGTCTTATGTGGTGCAATGGTATCATATCCGGGCCACTTTTGTTTATTTGGACATTAGTTCGGGGTGACTTGACGACGACTATTAATTTTCCTCATCTTCTTTCGCTTGGTTTTATTGTTGTTTTGCTTTTATCCTGCATCCTCGCTTTCTTCCTGAACTACAGTATCTTCCTGAACACAACTTTAAATTCAGCTCTGACACAAACAATTTGTGGTAATATGAAGGATCTATTTACAATTGGCTTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTTGGAATGTTGTTGGACAATCTCTCGGATTTGCGGGTTCTGGTTTATATGCCTACTATAAACTCATTGGCAAATAG 1053 0.4017 MSHKPSYSSENMLPVSDPPNDEDRERLLQGDDKIFRGSSMTRRGVFAAISYMSCAVLLVMFNKAALSSYNFPSANFIALLQMVCSCCFLYVLRRRRIISFTSGEAAIISENSKIFVPLKTLRHAFPIAGSYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFILVGQRYTRSIIFSVGLIVFGAFIAGARDLSFDAYGYAIVFLSNIATAIYLATIARVGKTSGLNSFGLMWCNGIISGPLLFIWTLVRGDLTTTINFPHLLSLGFIVVLLLSCILAFFLNYSIFLNTTLNSALTQTICGNMKDLFTIGFGWIIFGGLPFDFWNVVGQSLGFAGSGLYAYYKLIGK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01351 350 Pfam Triose-phosphate Transporter family 54 342 IPR004853 -
Vivi3g01351 350 MobiDBLite consensus disorder prediction 1 15 - -
Vivi3g01351 350 MobiDBLite consensus disorder prediction 1 23 - -
Vivi3g01351 350 PANTHER SOLUTE CARRIER FAMILY 35 46 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01351 Vivi-Chr3 22060940 22065515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01351 17 239 Organic Solute Cotransporters AT2G13650 26.293 2.31e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01351 K15281 - gmx:100819763 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01351 3 22060940 22065515 Vivi3g01351 3 22060940 22065515 ECH
Vivi4g05100 4 182074218 182078181 Vivi3g01351 3 22060940 22065515 PCT