Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01337 ATGGGCGAGGCCGATGCATCTAAGGGACTAAAAACTCAAGCTCAAACAATGAACAAAGACAACAGATCAGAAGATTTTTGGAGCAGCAGTGCTATTGAATTGGATCACAGTGCAACTCAATCCCAGAGAAGCATCTCGTCAATTGTCGTGTCAAGCCATCCTTCTGATCCTCAAAGTAGTGATGGCATTCAGACCGATCCTCCAGAGTTTGTTAATCATGGTCTTCTTCTGTGGAACCAAGGAAGACAACAGTGGATTGGAAATAGAAAACCTGAACGAAAGACACAAGTTGGAGAACCCAAAATAAGTTGGAATGCCTCGTACGAGGGTTTTCTTGGGACTAGCAAGCCATTTCCACAGCGTATTCCTCTTGGAGAAATGGTTGACTTTCTTGTTGATATATGGGAACTAGAGGGCATGTATGATTAA 429 0.4312 MGEADASKGLKTQAQTMNKDNRSEDFWSSSAIELDHSATQSQRSISSIVVSSHPSDPQSSDGIQTDPPEFVNHGLLLWNQGRQQWIGNRKPERKTQVGEPKISWNASYEGFLGTSKPFPQRIPLGEMVDFLVDIWELEGMYD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01337 142 MobiDBLite consensus disorder prediction 9 66 - -
Vivi3g01337 142 Pfam Protein of unknown function (DUF4050) 34 97 IPR025124 -
Vivi3g01337 142 Pfam Protein of unknown function (DUF4050) 101 142 IPR025124 -
Vivi3g01337 142 MobiDBLite consensus disorder prediction 1 67 - -
Vivi3g01337 142 PANTHER OS07G0479600 PROTEIN 5 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01337 Vivi-Chr3 21779166 21781431 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01337 - - tpra:123898289 247.669